RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 DOCK10Q96BY6 2186 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 CR1P17927 2039 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 A0A075B6Q4 140 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 IGHV6-1A0A0B4J1U7 121 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 TMEM72A0PK05 275 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 A6NED7 52 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 ZNF729A6NN14 1252 aaPredicted RBP0.57□□□□□ -2.32
SRP54-207ENST00000555535 HACD1B0YJ81 288 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 LINC01619G3V211 115 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 J3QT63 122 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 ISLRO14498 428 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 TRDMT1O14717 391 aaKnown RBP0.57□□□□□ -2.32
SRP54-207ENST00000555535 XRCC2O43543 280 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 NDUFS5O43920 106 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 IGKV1D-33P01593 117 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 IGKV1-33P01594 117 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 RHOCP08134 193 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 HLA-GP17693 338 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 PTMSP20962 102 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 CXCR1P25024 350 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 SLC6A1P30531 599 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 PRSS3P35030 304 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 ARL2P36404 184 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 RPS5P46782 204 aaKnown RBP0.57□□□□□ -2.32
SRP54-207ENST00000555535 LGALS7P47929 136 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 FOXA1P55317 472 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 RPL10AP62906 217 aaKnown RBP0.57□□□□□ -2.32
SRP54-207ENST00000555535 SLC35A1P78382 337 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 LAMTOR4Q0VGL1 99 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 PMVKQ15126 192 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 ELOCQ15369 112 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 ZNF470Q6ECI4 717 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 CYHR1Q6ZMK1 362 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 NDUFAF7Q7L592 441 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 VTCN1Q7Z7D3 282 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 PRNTQ86SH4 94 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 SLC7A5P1Q8MH63 180 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 BBS5Q8N3I7 341 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 OR2M7Q8NG81 312 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 OR5C1Q8NGR4 320 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 OR8S1Q8NH09 359 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 ITFG1Q8TB96 612 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 C2orf15Q8WU43 125 aaKnown RBP0.57□□□□□ -2.32
SRP54-207ENST00000555535 ISOC2Q96AB3 205 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 RNF170Q96K19 258 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 SMIM8Q96KF7 97 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 UBE2E2Q96LR5 201 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 TGS1Q96RS0 853 aaKnown RBP0.57□□□□□ -2.32
SRP54-207ENST00000555535 TEAD3Q99594 435 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 BEX2Q9BXY8 128 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 ULBP1Q9BZM6 244 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 SRRQ9GZT4 340 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 GABARAPL1Q9H0R8 117 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 ELOVL6Q9H5J4 265 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 FAM60AQ9NP50 221 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 ABCB9Q9NP78 766 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 MRPL22Q9NWU5 206 aaKnown RBP0.57□□□□□ -2.32
SRP54-207ENST00000555535 NMRK1Q9NWW6 199 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 MRPL16Q9NX20 251 aaKnown RBP0.57□□□□□ -2.32
SRP54-207ENST00000555535 TBC1D24Q9ULP9 559 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 RABL2BQ9UNT1 228 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 ZNF257Q9Y2Q1 563 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 RRP15Q9Y3B9 282 aaKnown RBP0.57□□□□□ -2.32
SRP54-207ENST00000555535 CHTOPQ9Y3Y2 248 aaKnown RBP0.57□□□□□ -2.32
SRP54-207ENST00000555535 ORC6Q9Y5N6 252 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 TRAPPC1Q9Y5R8 145 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 TRPM3Q9HCF6 1732 aaPredicted RBP0.57□□□□□ -2.32
SRP54-207ENST00000555535 PCDH15Q96QU1 1955 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 PHLPP2Q6ZVD8 1323 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 LAMB2P55268 1798 aa0.57□□□□□ -2.32
SRP54-207ENST00000555535 SPATA31E1Q6ZUB1 1445 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 KCNE1BA0A087WTH5 132 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 TRAV8-4A0A0B4J246 113 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 A0A1W2PNM2 257 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 MYBPHLA2RUH7 354 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 LRRIQ4A6NIV6 560 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 SUPT3HB4E1H0 165 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 IGLL5B9A064 214 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 D6RAR5 112 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 WRBO00258 174 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 DNALI1O14645 258 aaPredicted RBP0.56□□□□□ -2.32
SRP54-207ENST00000555535 ZBTB5O15062 677 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 ERI3O43414 337 aaKnown RBP0.56□□□□□ -2.32
SRP54-207ENST00000555535 CACNG3O60359 315 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 HSBP1O75506 76 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 SMC2O95347 1197 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 AGTP01019 485 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 P01737 135 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 KRT14P02533 472 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 SLC35G6P0C7Q6 338 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 PAX6P26367 422 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 OTX1P32242 354 aaPredicted RBP0.56□□□□□ -2.32
SRP54-207ENST00000555535 PSMB2P49721 201 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 NUDT2P50583 147 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 OR2B8PP59922 312 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 DEFB103AP81534 67 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 BEX3Q00994 111 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 RPEL1Q2QD12 228 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 PCOTHQ58A44 107 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 ZFAND6Q6FIF0 208 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms