RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 ITGB1BP1O14713 200 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 PSPHP1O15172 72 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 PLIN3O60664 434 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 MYO1DO94832 1006 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 BRI3O95415 125 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 P01737 135 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 CD74P04233 296 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 IL4P05112 153 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 UBE2G2P60604 165 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 RPL31P62899 125 aaKnown RBP3.19□□□□□ -1.9
VRK1-205ENST00000555402 IFFO1Q0D2I5 559 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 INCA1Q0VD86 236 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 CDC20Q12834 499 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 ITGB3BPQ13352 177 aaPredicted RBP3.19□□□□□ -1.9
VRK1-205ENST00000555402 DMC1Q14565 340 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 TNXAQ16473 311 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 ZNF880Q6PDB4 577 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 TPGS1Q6ZTW0 290 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 SYS1Q8N2H4 156 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 FAM19A4Q96LR4 140 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 LINC00477Q96M19 166 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 UTP23Q9BRU9 249 aaKnown RBP3.19□□□□□ -1.9
VRK1-205ENST00000555402 MED10Q9BTT4 135 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 NUDT9Q9BW91 350 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 ANGPTL4Q9BY76 406 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 ULBP2Q9BZM5 246 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 DRC3Q9H069 523 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 SYT4Q9H2B2 425 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 OR2S2Q9NQN1 319 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 HEBP1Q9NRV9 189 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 C21orf62Q9NYP8 219 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 SCML1Q9UN30 329 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 CFL2Q9Y281 166 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 LRRC42Q9Y546 428 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 PUS1Q9Y606 427 aaKnown RBP eCLIP3.19□□□□□ -1.9
VRK1-205ENST00000555402 URGCP-MRPS24S4R325 110 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 MYO10Q9HD67 2058 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 SLIT3O75094 1523 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 POLR3AO14802 1390 aaPredicted RBP3.18□□□□□ -1.9
VRK1-205ENST00000555402 CABIN1Q9Y6J0 2220 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 MGAT4DA6NG13 374 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 SC5DO75845 299 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 MPZL1O95297 269 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 BGNP21810 368 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 CXCR1P25024 350 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 GNRHRP30968 328 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 P2RY2P41231 377 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 CDKL4Q5MAI5 379 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 C8orf74Q6P047 294 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 RNF10Q8N5U6 811 aaKnown RBP3.18□□□□□ -1.9
VRK1-205ENST00000555402 OR5T1Q8NG75 326 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 OR4M2Q8NGB6 313 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 OR6N2Q8NGY6 317 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 ENKURQ8TC29 256 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 TMEM239Q8WW34 195 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 CDKL2Q92772 493 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 LRRC45Q96CN5 670 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 C18orf15Q96N68 181 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 C7orf50Q9BRJ6 194 aaKnown RBP3.18□□□□□ -1.9
VRK1-205ENST00000555402 TIMM29Q9BSF4 260 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 CHRNA10Q9GZZ6 450 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 OR51B5Q9H339 312 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 EMC3Q9P0I2 261 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 NXT1Q9UKK6 140 aaKnown RBP3.18□□□□□ -1.9
VRK1-205ENST00000555402 ZNF835Q9Y2P0 537 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 ARID1AO14497 2285 aa3.18□□□□□ -1.9
VRK1-205ENST00000555402 PLA2R1Q13018 1463 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 ADCY9O60503 1353 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 TRAV8-7A0A075B6U6 113 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 IGHV2OR16-5A0A0B4J2B6 119 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 ZNF850A8MQ14 1090 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 ZW10O43264 779 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 WISP3O95389 354 aaPredicted RBP3.17□□□□□ -1.9
VRK1-205ENST00000555402 FADS2O95864 444 aaKnown RBP3.17□□□□□ -1.9
VRK1-205ENST00000555402 CYB5R3P00387 301 aaPredicted RBP3.17□□□□□ -1.9
VRK1-205ENST00000555402 OCMP0CE72 109 aaPredicted RBP3.17□□□□□ -1.9
VRK1-205ENST00000555402 RD3LP0DJH9 198 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 PRLHRP49683 370 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 ERFP50548 548 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 FAM27D1Q5T7N8 215 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 KDM4DQ6B0I6 523 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 APOBEC3HQ6NTF7 200 aaKnown RBP3.17□□□□□ -1.9
VRK1-205ENST00000555402 PLEKHG7Q6ZR37 379 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 OR1L1Q8NH94 360 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 LGALS14Q8TCE9 139 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 ESR2Q92731 530 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 SERPINB11Q96P15 392 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 SPZ1Q9BXG8 430 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 HMGXB4Q9UGU5 601 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 RAB23Q9ULC3 237 aa3.17□□□□□ -1.9
VRK1-205ENST00000555402 BRCA1P38398 1863 aaKnown RBP3.17□□□□□ -1.9
VRK1-205ENST00000555402 ZNF608Q9ULD9 1512 aaPredicted RBP3.16□□□□□ -1.9
VRK1-205ENST00000555402 TRAV8-6A0A0B4J262 113 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 TRAV40A0A0B4J280 105 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 ANKRD20A5PA0PJZ0 165 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 TVP23AA6NH52 213 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 PRMT5O14744 637 aaPredicted RBP3.16□□□□□ -1.9
VRK1-205ENST00000555402 COCHO43405 550 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 ALOX12BO75342 701 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms