RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 NUP50Q9UKX7 468 aa10.28□□□□□ -0.76
TRAPPC6B-205ENST00000555269 DOCK11Q5JSL3 2073 aa10.27□□□□□ -0.76
TRAPPC6B-205ENST00000555269 IGKV1-27A0A075B6S5 117 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ERICH4A6NGS2 130 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 OR4C45A6NMZ5 311 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 OR2AT4A6NND4 320 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 DHRS7CA6NNS2 312 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ENSAO43768 121 aaKnown RBP10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SFTPBP07988 381 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ACAA1P09110 424 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 GNAO1P09471 354 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 LIMS3P0CW19 117 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 LIMS4P0CW20 117 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PSG2P11465 335 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 FPR2P25090 351 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ETV1P50549 477 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 GTF2A1P52655 376 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ALKBH1Q13686 389 aaKnown RBP10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 DGUOKQ16854 277 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 KLHL22Q53GT1 634 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ARMCX4Q5H9R4 360 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 TMEM244Q5VVB8 128 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 TTC23Q5W5X9 447 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ZNF788Q6ZQV5 615 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SLC36A1Q7Z2H8 476 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 RNF144BQ7Z419 303 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CALHM1Q8IU99 346 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 BPIFB2Q8N4F0 458 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CD177Q8N6Q3 437 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PACRGLQ8N7B6 248 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 OR51A4Q8NGJ6 313 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ZNF418Q8TF45 676 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 TMIGD2Q96BF3 282 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 UPRTQ96BW1 309 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 C12orf43Q96C57 262 aaKnown RBP10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PCGF1Q9BSM1 259 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 C19orf24Q9BVV8 132 aa10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 FGF20Q9NP95 211 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC6B-205ENST00000555269 IGKV1-9A0A0C4DH69 117 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 RFPL4AA6NLU0 287 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 RFPL4AL1F8VTS6 287 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 F8VVB4 439 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 F8VWA3 439 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CASQ2O14958 399 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 NDUFB3O43676 98 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 UBCP0CG48 685 aaKnown RBP10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CCR9P51686 369 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ACTA2P62736 377 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ACTG2P63267 376 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 GABPB1Q06547 395 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ACP7Q6ZNF0 438 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SYS1Q8N2H4 156 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SIGLECL1Q8N7X8 197 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 POC1AQ8NBT0 407 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ZNRF1Q8ND25 227 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SPATA3Q8NHX4 192 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 MED30Q96HR3 178 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ZNF48Q96MX3 618 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 TBX15Q96SF7 602 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 DCLRE1BQ9H816 532 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CNTD2Q9H8S5 307 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PLEKHA1Q9HB21 404 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ESM1Q9NQ30 184 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CLEC2DQ9UHP7 191 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 RPUSD1Q9UJJ7 312 aaKnown RBP10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SLC7A11Q9UPY5 501 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 MAB21L2Q9Y586 359 aa10.26□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ZNF879B4DU55 563 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 J3QT63 122 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 NOS1APO75052 506 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 TOX4O94842 621 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ZFPL1O95159 310 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PLATP00750 562 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SERPINA3P01011 423 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ISG15P05161 165 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 LIPFP07098 398 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PGA5P0DJD9 388 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PPIAL4GP0DN37 164 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 MMP9P14780 707 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PRDX2P32119 198 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CAPGP40121 348 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CEBPDP49716 269 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 FUT6P51993 359 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PRB3Q04118 309 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SCGB2A2Q13296 93 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 OR2G6Q5TZ20 316 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 XAF1Q6GPH4 301 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 LAIR2Q6ISS4 152 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PDZD9Q8IXQ8 264 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ZNF676Q8N7Q3 588 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PNLDC1Q8NA58 520 aaKnown RBP10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 LY6G5BQ8NDX9 201 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CCDC54Q8NEL0 328 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 NRG4Q8WWG1 115 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 H1FXQ92522 213 aaKnown RBP10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 GGHQ92820 318 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 MRPL48Q96GC5 212 aaKnown RBP10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 WDFY2Q96P53 400 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 DUX5Q96PT3 197 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PDCD1LG2Q9BQ51 273 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms