RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	OR4D11	Q8NGI4	311 aa		4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	OR4C15	Q8NGM1	316 aa		4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	OR10G8	Q8NGN5	311 aa		4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	GATAD1	Q8WUU5	269 aa		4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	ANKRD27	Q96NW4	1050 aa		4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	ZNF317	Q96PQ6	595 aa	Predicted RBP	4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	COQ7	Q99807	217 aa		4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	PAIP2	Q9BPZ3	127 aa	Known RBP	4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	PARD6B	Q9BYG5	372 aa		4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	BCL2L10	Q9HD36	194 aa		4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	DYNLRB1	Q9NP97	96 aa		4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	ESM1	Q9NQ30	184 aa		4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	ZNF275	Q9NSD4	429 aa	Predicted RBP	4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	MAN2C1	Q9NTJ4	1040 aa		4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	EXTL2	Q9UBQ6	330 aa		4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	MMP24	Q9Y5R2	645 aa		4.15	□□□□□ -1.75
PSMC6-208	ENST00000554956	TENM1	Q9UKZ4	2725 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	MGAM2	Q2M2H8	2515 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	TRAV36DV7	A0A075B6V5	113 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956		A0A096LPI6	279 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956		A0A0B4J2E0	115 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956		A0A0U1RRA0	63 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956		A0A1B0GWJ7	208 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956		A0A1B0GX12	115 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	TMEM120B	A0PK00	339 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	TMEM89	A2RUT3	159 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956		B4DSR2	109 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956		M0R233	179 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	TM9SF1	O15321	606 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	NXPH2	O95156	264 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	IL6	P05231	212 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	MSMB	P08118	114 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	IDO1	P14902	403 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	AQP1	P29972	269 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	SOX6	P35712	828 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	GLRX	P35754	106 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	GPR6	P46095	362 aa	Predicted RBP	4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	POLR2J	P52435	117 aa	Known RBP	4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	CCL8	P80075	99 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	GABPB1	Q06547	395 aa	Predicted RBP	4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	PMS2P3	Q13401	168 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	C1D	Q13901	141 aa	Known RBP	4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	SELPLG	Q14242	412 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	OR1Q1	Q15612	314 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	ZNF74	Q16587	644 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	GSG1	Q2KHT4	349 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	DHRS4L2	Q6PKH6	230 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	SLC25A47	Q6Q0C1	308 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	C12orf54	Q6X4T0	127 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	ZNF573	Q86YE8	665 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	LRRC17	Q8N6Y2	441 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	ZDHHC22	Q8N966	263 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	GPR32P1	Q8NGA4	272 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	C22orf15	Q8WYQ4	148 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	RDH5	Q92781	318 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	SLC38A4	Q969I6	547 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	TMEM54	Q969K7	222 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	FAHD2A	Q96GK7	314 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	ITCH	Q96J02	903 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	ZBTB18	Q99592	522 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	SH3GL3	Q99963	347 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	EBF4	Q9BQW3	602 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	TPPP3	Q9BW30	176 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	OR51B6	Q9H340	312 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	CENPH	Q9H3R5	247 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	TMEM231	Q9H6L2	316 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	EGLN3	Q9H6Z9	239 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	DCLRE1B	Q9H816	532 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	VIPAS39	Q9H9C1	493 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	TAS2R5	Q9NYW4	299 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	CALML5	Q9NZT1	146 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	VAPA	Q9P0L0	249 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	OPN4	Q9UHM6	478 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	LAMP5	Q9UJQ1	280 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	IFT52	Q9Y366	437 aa		4.14	□□□□□ -1.75
PSMC6-208	ENST00000554956	IGLV3-9	A0A075B6K5	115 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	IGKV1D-43	A0A0B4J1Z2	117 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	MEX3A	A1L020	520 aa	Known RBP	4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	C11orf98	E9PRG8	122 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	UBD	O15205	165 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	PPIH	O43447	177 aa	Known RBP	4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	OR2T1	O43869	369 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	MFN2	O95140	757 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	ANP32D	O95626	131 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	OPN1SW	P03999	348 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	SERPINA5	P05154	406 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	SLC2A2	P11168	524 aa	Predicted RBP	4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	ETS2	P15036	469 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	NQO1	P15559	274 aa	Known RBP	4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	EVX1	P49640	407 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	CRYBA2	P53672	197 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	BID	P55957	195 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	TMEM33	P57088	247 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	SST	P61278	116 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	CDK6	Q00534	326 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	PUDP	Q08623	228 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	LRRC74A	Q0VAA2	488 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	FADD	Q13158	208 aa		4.13	□□□□□ -1.75
PSMC6-208	ENST00000554956	DUSP7	Q16829	419 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms