RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 NOTCH3Q9UM47 2321 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 NUP214P35658 2090 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-228ENST00000554592 IGKV1D-43A0A0B4J1Z2 117 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 TRAV38-1A0A0B4J264 116 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 IGHV3-64DA0A0J9YX35 117 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 F5H5P2 479 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 LGALS8O00214 317 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 FBP2O00757 339 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 NPFFO15130 113 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 SLC22A3O75751 556 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 KDM4BO94953 1096 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 DUS4LO95620 317 aaKnown RBP3.92□□□□□ -1.78
ATXN3-228ENST00000554592 CD28P10747 220 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 HOXB6P17509 224 aaKnown RBP3.92□□□□□ -1.78
ATXN3-228ENST00000554592 FUT1P19526 365 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 MSR1P21757 451 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 CALRP27797 417 aaKnown RBP3.92□□□□□ -1.78
ATXN3-228ENST00000554592 ERFP50548 548 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 ABCE1P61221 599 aaKnown RBP3.92□□□□□ -1.78
ATXN3-228ENST00000554592 ELF3P78545 371 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-228ENST00000554592 CDK6Q00534 326 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 CD47Q08722 323 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 SCRN3Q0VDG4 424 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 MAB21L1Q13394 359 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 REEP3Q6NUK4 255 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 FBXW12Q6X9E4 464 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 MSANTD1Q6ZTZ1 278 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 FOXL2NBQ6ZUU3 175 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 NANOGNBQ7Z5D8 188 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 VMO1Q7Z5L0 202 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 COMTD1Q86VU5 262 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 CLDN22Q8N7P3 220 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 OR10AD1Q8NGE0 317 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 TCP10LQ8TDR4 215 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 TMED6Q8WW62 240 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 LYZL4Q96KX0 146 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 CITED2Q99967 270 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-228ENST00000554592 WFDC6Q9BQY6 131 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 ALG12Q9BV10 488 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 MMADHCQ9H3L0 296 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-228ENST00000554592 KCNK15Q9H427 330 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 MEAF6Q9HAF1 191 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 INIPQ9NRY2 104 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 AIG1Q9NVV5 245 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 CTSZQ9UBR2 303 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 RPUSD1Q9UJJ7 312 aaKnown RBP3.92□□□□□ -1.78
ATXN3-228ENST00000554592 TENM3Q9P273 2699 aa3.92□□□□□ -1.78
ATXN3-228ENST00000554592 A0A1B0GWJ7 208 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 ELOVL7A1L3X0 281 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 MEIOCA2RUB1 952 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 IQCF6A8MYZ5 107 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 ANKRD65E5RJM6 399 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 H3BUX3 64 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 J3QR06 171 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 KPNA4O00629 521 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-228ENST00000554592 DVL1O14640 695 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 MLNRO43193 412 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 SGCEO43556 437 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 OR10H3O60404 316 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 SPAG7O75391 227 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 DCTN3O75935 186 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 LYPD3O95274 346 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 ATP6V1G2O95670 118 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 SERPINE1P05121 402 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 PRSS2P07478 247 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 ZNF26P17031 533 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-228ENST00000554592 AQP2P41181 271 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 CD200P41217 278 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 HTR5AP47898 357 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 RGS6P49758 472 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 UBE2E1P51965 193 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 RAD23AP54725 363 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 FMODQ06828 376 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 RPL18Q07020 188 aaKnown RBP3.91□□□□□ -1.78
ATXN3-228ENST00000554592 ACSM1Q08AH1 577 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 BNIP1Q12981 228 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 UBE2V1Q13404 147 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 ENDOGQ14249 297 aaKnown RBP3.91□□□□□ -1.78
ATXN3-228ENST00000554592 OR8B8Q15620 311 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 NPTX1Q15818 432 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 AANATQ16613 207 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 GTDC1Q4AE62 458 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 FAM98BQ52LJ0 330 aaKnown RBP3.91□□□□□ -1.78
ATXN3-228ENST00000554592 CLEC12AQ5QGZ9 265 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 GCNT6Q5T4J0 391 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 C1orf94Q6P1W5 598 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 C10orf111Q8N326 155 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 LY6G5BQ8NDX9 201 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 C19orf18Q8NEA5 215 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 OR1F12Q8NHA8 337 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 SLC7A13Q8TCU3 470 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 LRRC8CQ8TDW0 803 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 LIPHQ8WWY8 451 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 VPS33AQ96AX1 596 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 SSX3Q99909 188 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 ZNF426Q9BUY5 554 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 SEMA6AQ9H2E6 1030 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 TXNIPQ9H3M7 391 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 SAR1AQ9NR31 198 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 POLE4Q9NR33 117 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms