RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SEMA6DQ8NFY4 1073 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 KBTBD8Q8NFY9 601 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 OR1J1Q8NGS3 322 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 OR5AK2Q8NH90 309 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 LILRB1Q8NHL6 650 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-212ENST00000554486 SLC25A40Q8TBP6 338 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 IGFBPL1Q8WX77 278 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 NEUROG1Q92886 237 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 UFD1Q92890 307 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 PIK3IP1Q96FE7 263 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 REEP6Q96HR9 211 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 KCNS3Q9BQ31 491 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 BCL2L14Q9BZR8 327 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 OR2J1Q9GZK6 312 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 ESRP2Q9H6T0 727 aaKnown RBP5.36□□□□□ -1.55
SCFD1-212ENST00000554486 SP140LQ9H930 580 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 GPR84Q9NQS5 396 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 NDUFB11Q9NX14 153 aa5.36□□□□□ -1.55
SCFD1-212ENST00000554486 RAI1Q7Z5J4 1906 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-212ENST00000554486 TRBV5-5A0A0J9YX44 114 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 A0A1W2PPR1 153 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 LOC390937A0A1W2PQ73 354 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 HMX3A6NHT5 357 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 A6NNC1 897 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 E7EQL1 145 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 H3BSA7 217 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 CCRL2O00421 344 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 RRHO14718 337 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 XRCC2O43543 280 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 RBMXL2O75526 392 aaKnown RBP5.35□□□□□ -1.55
SCFD1-212ENST00000554486 SC5DO75845 299 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 UBCP0CG48 685 aaKnown RBP5.35□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF250P15622 560 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 CD36P16671 472 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 ACHEP22303 614 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 GADD45AP24522 165 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 ACKR3P25106 362 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 GABRA5P31644 462 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 GLRXP35754 106 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 CRYBB2P43320 205 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 RAD52P43351 418 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 FAM3AP98173 230 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 FABP5Q01469 135 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 GK2Q14410 553 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-212ENST00000554486 TMEM95Q3KNT9 176 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 ALKBH6Q3KRA9 238 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 TMEM244Q5VVB8 128 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 SUMO4Q6EEV6 95 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 TMEM65Q6PI78 240 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 CD200R1LQ6Q8B3 271 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 SLC22A25Q6T423 547 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 UNQ9370/PRO34162Q6UXP9 181 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 TMEM91Q6ZNR0 172 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 MRPL21Q7Z2W9 205 aaKnown RBP5.35□□□□□ -1.55
SCFD1-212ENST00000554486 SATL1Q86VE3 508 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 LRP11Q86VZ4 500 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 MS4A15Q8N5U1 240 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 PNLDC1Q8NA58 520 aaKnown RBP5.35□□□□□ -1.55
SCFD1-212ENST00000554486 NUP37Q8NFH4 326 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 OR5L1Q8NGL2 311 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 KLF14Q8TD94 323 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-212ENST00000554486 AKAP1Q92667 903 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCFD1-212ENST00000554486 TMEM203Q969S6 136 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 HAVCR1Q96D42 359 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 CMBLQ96DG6 245 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 RADILQ96JH8 1075 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 FAM71F1Q96KD3 344 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-212ENST00000554486 FYTTD1Q96QD9 318 aaKnown RBP5.35□□□□□ -1.55
SCFD1-212ENST00000554486 TMED9Q9BVK6 235 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 COMMD4Q9H0A8 199 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 RGCCQ9H4X1 137 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 SEPSECSQ9HD40 501 aaKnown RBP5.35□□□□□ -1.55
SCFD1-212ENST00000554486 KCNN3Q9UGI6 736 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF391Q9UJN7 358 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 FZR1Q9UM11 496 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 HHLA2Q9UM44 414 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 RNF115Q9Y4L5 304 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 V9GYS6 101 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 CACNA1DQ01668 2161 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 DSCAMO60469 2012 aa5.35□□□□□ -1.55
SCFD1-212ENST00000554486 FBN2P35556 2912 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 NBPF19A0A087WUL8 3843 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 SPG11Q96JI7 2443 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 TRBV5-7A0A0A0MS05 114 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 A0A1B0GVI7 797 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 A6NIN4 97 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 LINC01548A6NM66 108 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 CD300LBA8K4G0 201 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF879B4DU55 563 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 GABRPO00591 440 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 PIN1P1O15428 100 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 SYT7O43581 403 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 GPX5O75715 221 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 DHRS3O75911 302 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 COX6B1P14854 86 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 KITLGP21583 273 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 TUBG1P23258 451 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 CFL1P23528 166 aaKnown RBP5.34□□□□□ -1.55
SCFD1-212ENST00000554486 SOX2P48431 317 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 FABP6P51161 128 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms