RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ZNF337Q9Y3M9 751 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 UBIAD1Q9Y5Z9 338 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 SLC25A15Q9Y619 301 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 IGLV1-36A0A0B4J1U3 117 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 A0A1B0GUA9 196 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 C21orf140B9A014 251 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 PGRMC1O00264 195 aaKnown RBP3.27□□□□□ -1.89
SCFD1-211ENST00000554437 CXCR6O00574 342 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 TCRBP04435 133 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 CSF3P09919 207 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 PSG2P11465 335 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 RCC1P18754 421 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-211ENST00000554437 MSNP26038 577 aaKnown RBP3.27□□□□□ -1.89
SCFD1-211ENST00000554437 G0S2P27469 103 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 GRPRP30550 384 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 VSX2P58304 361 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-211ENST00000554437 ARPC4P59998 168 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 LSM6P62312 80 aaKnown RBP3.27□□□□□ -1.89
SCFD1-211ENST00000554437 RPS21P63220 83 aaKnown RBP3.27□□□□□ -1.89
SCFD1-211ENST00000554437 AESQ08117 197 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 FZD2Q14332 565 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 NSDHLQ15738 373 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 TFDP3Q5H9I0 405 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 SYPL2Q5VXT5 272 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 LCN12Q6JVE5 192 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 CASP12Q6UXS9 341 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 NPWQ8N729 165 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 Q8N9L7 120 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 NEIL3Q8TAT5 605 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 NT5CQ8TCD5 201 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 LRRC29Q8WV35 223 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 C22orf15Q8WYQ4 148 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 IL22RA2Q969J5 263 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 TESCQ96BS2 214 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 WFIKKN1Q96NZ8 548 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 NRTNQ99748 197 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 TMEM208Q9BTX3 173 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 CDCA4Q9BXL8 241 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 SLC19A3Q9BZV2 496 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 METTL9Q9H1A3 318 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 RHOFQ9HBH0 211 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 ZNF331Q9NQX6 463 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-211ENST00000554437 SLC2A9Q9NRM0 540 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 DDIT4Q9NX09 232 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 CLCF1Q9UBD9 225 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 ZNF629Q9UEG4 869 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-211ENST00000554437 STOML2Q9UJZ1 356 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 ZNF257Q9Y2Q1 563 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 V9GYQ6 96 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 CDC42BPBQ9Y5S2 1711 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 ADGRL3Q9HAR2 1447 aa3.27□□□□□ -1.89
SCFD1-211ENST00000554437 ABCC11Q96J66 1382 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 TINCRA0A1B0GVN0 87 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 XKRYO14609 159 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 UGT2B11O75310 529 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 TYMSP04818 313 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 PCCAP05165 728 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-211ENST00000554437 FABP1P07148 127 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 ERGP11308 486 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 WARSP23381 471 aaKnown RBP3.26□□□□□ -1.89
SCFD1-211ENST00000554437 COX7A1P24310 79 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 MYCNOSP40205 109 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 CTRLP40313 264 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 CBX5P45973 191 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 SLCO1A2P46721 670 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 RPS9P46781 194 aaKnown RBP3.26□□□□□ -1.89
SCFD1-211ENST00000554437 PSMD7P51665 324 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 TAS2R19P59542 299 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 PRPSAP1Q14558 356 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 OR1Q1Q15612 314 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 GUK1Q16774 197 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 SLC25A35Q3KQZ1 300 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 TMEM176BQ3YBM2 270 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-211ENST00000554437 CHRFAM7AQ494W8 412 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 SPIN4Q56A73 249 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 CD200R1LQ6Q8B3 271 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 LRRN1Q6UXK5 716 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 RTL4Q6ZR62 310 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 RNF165Q6ZSG1 346 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 CCDC121Q6ZUS5 278 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 GAPTQ8N292 157 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 ZNF433Q8N7K0 673 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-211ENST00000554437 NKAPP1Q8N9T2 125 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 SUMF2Q8NBJ7 301 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 OR10J6PQ8NGY7 276 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 PIFOQ8TCI5 191 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 NELFBQ8WX92 580 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 RXFP2Q8WXD0 754 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 RDH5Q92781 318 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 RAB8BQ92930 207 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 DDIT4LQ96D03 193 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 FCRL1Q96LA6 429 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 RDH12Q96NR8 316 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 PRAP1Q96NZ9 151 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 SULT4A1Q9BR01 284 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 UGT2B28Q9BY64 529 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 LHX5Q9H2C1 402 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 CLMPQ9H6B4 373 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 TMEM27Q9HBJ8 222 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 MMP26Q9NRE1 261 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms