RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 INSIG2Q9Y5U4 225 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 A0A0A6YYJ9 748 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 TRAV38-1A0A0B4J264 116 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 ZNF816-ZNF321PA0A0X1KG74 233 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 LOC110117498-PIK3R3F6TDL0 507 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 TRAPPC2LH3BP13 241 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 SRSF10O75494 262 aaKnown RBP10.9□□□□□ -0.66
SHMT2-211ENST00000554310 APOL3O95236 402 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 FSHBP01225 129 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 IGLV3-1P01715 115 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 KRT8P05787 483 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 ADRA2CP18825 462 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 SOX6P35712 828 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 ATP6V1E1P36543 226 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 NPY4RP50391 375 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 MFGE8Q08431 387 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-211ENST00000554310 BCL2L15Q5TBC7 163 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 ZBTB37Q5TC79 503 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 LIPKQ5VXJ0 399 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 BTNL3Q6UXE8 466 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 TMPRSS11AQ6ZMR5 421 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 ZNF826PQ6ZT77 177 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 ZDHHC23Q8IYP9 409 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 MFSD4AQ8N468 514 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 BOLLQ8N9W6 283 aaKnown RBP10.9□□□□□ -0.66
SHMT2-211ENST00000554310 C19orf18Q8NEA5 215 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 LRRC29Q8WV35 223 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 OR5P3Q8WZ94 311 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 OCEL1Q9H607 264 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 RNF167Q9H6Y7 350 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 GPR84Q9NQS5 396 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 MRM2Q9UI43 246 aaKnown RBP10.9□□□□□ -0.66
SHMT2-211ENST00000554310 AUP1Q9Y679 476 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 R4GMQ9 66 aa10.9□□□□□ -0.66
SHMT2-211ENST00000554310 A0A075B6Q4 140 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 IGHV2-70DA0A0C4DH43 119 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 A0A1B0GVG6 124 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 ZNF850A8MQ14 1090 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 C3orf80F5H4A9 247 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 MTRF1O75570 445 aaKnown RBP10.89□□□□□ -0.67
SHMT2-211ENST00000554310 DHRS3O75911 302 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 LHBP01229 141 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 TTRP02766 147 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 OR2T7P0C7T2 308 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 PPIAL4GP0DN37 164 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 GABRA5P31644 462 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 CFHR2P36980 270 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 ACTC1P68032 377 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 ACTA1P68133 377 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 PAX2Q02962 417 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 GPR50Q13585 617 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 KRTAP24-1Q3LI83 254 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 TEX36Q5VZQ5 186 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 WDR25Q64LD2 544 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-211ENST00000554310 SFRP4Q6FHJ7 346 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-211ENST00000554310 C16orf87Q6PH81 154 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 CD200R1LQ6Q8B3 271 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 LYPD2Q6UXB3 125 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 WDR82Q6UXN9 313 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 LHFPL3Q86UP9 236 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 FAM90A1Q86YD7 464 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 C11orf53Q8IXP5 236 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 SEMA6DQ8NFY4 1073 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 OR10H4Q8NGA5 316 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 OR2T27Q8NH04 317 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 OR51E1Q8TCB6 317 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 ZNF418Q8TF45 676 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-211ENST00000554310 HPSE2Q8WWQ2 592 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 GATAD2BQ8WXI9 593 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 DACT3Q96B18 629 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-211ENST00000554310 HIST1H2AAQ96QV6 131 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 PPP1R3EQ9H7J1 279 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 EXOSC4Q9NPD3 245 aaKnown RBP10.89□□□□□ -0.67
SHMT2-211ENST00000554310 GTF2A1LQ9UNN4 478 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 PEX16Q9Y5Y5 336 aa10.89□□□□□ -0.67
SHMT2-211ENST00000554310 TRDV1A0A1B0GX56 115 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 A0A1W2PQL4 384 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-211ENST00000554310 OR5B21A6NL26 309 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 SRRM5B3KS81 715 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 J3QRK9 145 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 SULT1C4O75897 302 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 IL1AP01583 271 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 MUC1P15941 1255 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-211ENST00000554310 EGR1P18146 543 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 GALP22466 123 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 FGF9P31371 208 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-211ENST00000554310 HOXA4Q00056 320 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-211ENST00000554310 RIPPLY1Q0D2K3 151 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 GALEQ14376 348 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 MICBQ29980 383 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 FAM76BQ5HYJ3 339 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 ZNF841Q6ZN19 808 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 SSX6Q7RTT6 188 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 ELMOD2Q8IZ81 293 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 BPIFB2Q8N4F0 458 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 OR10Z1Q8NGY1 313 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 RAB40AQ8WXH6 277 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 PIGCQ92535 297 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 FAM71F1Q96KD3 344 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-211ENST00000554310 TECTBQ96PL2 329 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms