RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 FAHD1Q6P587 224 aa15.31■□□□□ 0.04
CPSF2-203ENST00000554290 ZNF561Q8N587 486 aa15.31■□□□□ 0.04
CPSF2-203ENST00000554290 MNTQ99583 582 aa15.31■□□□□ 0.04
CPSF2-203ENST00000554290 SSX3Q99909 188 aa15.31■□□□□ 0.04
CPSF2-203ENST00000554290 TTTY10Q9BZA0 68 aa15.31■□□□□ 0.04
CPSF2-203ENST00000554290 MOB1AQ9H8S9 216 aa15.31■□□□□ 0.04
CPSF2-203ENST00000554290 C19orf12Q9NSK7 152 aa15.31■□□□□ 0.04
CPSF2-203ENST00000554290 FBLN5Q9UBX5 448 aa15.31■□□□□ 0.04
CPSF2-203ENST00000554290 COPS3Q9UNS2 423 aa15.31■□□□□ 0.04
CPSF2-203ENST00000554290 POMPQ9Y244 141 aa15.31■□□□□ 0.04
CPSF2-203ENST00000554290 POLDIP2Q9Y2S7 368 aa15.31■□□□□ 0.04
CPSF2-203ENST00000554290 LOC110117498-PIK3R3F6TDL0 507 aa15.3■□□□□ 0.04
CPSF2-203ENST00000554290 J3QT63 122 aa15.3■□□□□ 0.04
CPSF2-203ENST00000554290 PRKYO43930 277 aa15.3■□□□□ 0.04
CPSF2-203ENST00000554290 TTRP02766 147 aa15.3■□□□□ 0.04
CPSF2-203ENST00000554290 GABRA5P31644 462 aa15.3■□□□□ 0.04
CPSF2-203ENST00000554290 PRDX2P32119 198 aa15.3■□□□□ 0.04
CPSF2-203ENST00000554290 HAAOP46952 286 aa15.3■□□□□ 0.04
CPSF2-203ENST00000554290 RPL31P62899 125 aaKnown RBP15.3■□□□□ 0.04
CPSF2-203ENST00000554290 MFGE8Q08431 387 aaPredicted RBP15.3■□□□□ 0.04
CPSF2-203ENST00000554290 C2orf68Q2NKX9 166 aa15.3■□□□□ 0.04
CPSF2-203ENST00000554290 BCL2L15Q5TBC7 163 aa15.3■□□□□ 0.04
CPSF2-203ENST00000554290 HCP5Q6MZN7 132 aa15.3■□□□□ 0.04
CPSF2-203ENST00000554290 ZNF322Q6U7Q0 402 aaPredicted RBP15.3■□□□□ 0.04
CPSF2-203ENST00000554290 MEPCEQ7L2J0 689 aaKnown RBP15.3■□□□□ 0.04
CPSF2-203ENST00000554290 OR5K1Q8NHB7 308 aa15.3■□□□□ 0.04
CPSF2-203ENST00000554290 PPP1R14AQ96A00 147 aa15.3■□□□□ 0.04
CPSF2-203ENST00000554290 PRR32B1ATL7 298 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 DLGAP1O14490 977 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 NOS1APO75052 506 aaPredicted RBP15.29■□□□□ 0.04
CPSF2-203ENST00000554290 NXPH2O95156 264 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 PGA5P0DJD9 388 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 DAPP51397 102 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 CXCR4P61073 352 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 AANATQ16613 207 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 SLC35F2Q8IXU6 374 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 ELMOD2Q8IZ81 293 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 CD177Q8N6Q3 437 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 DTX3Q8N9I9 347 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 OR2T27Q8NH04 317 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 ZNF488Q96MN9 340 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 APOL4Q9BPW4 351 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 MEGF9Q9H1U4 602 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 RAB18Q9NP72 206 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 USE1Q9NZ43 259 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.29■□□□□ 0.04
CPSF2-203ENST00000554290 R4GMQ9 66 aa15.29■□□□□ 0.04
CPSF2-203ENST00000554290 ZNF670-ZNF695F2Z2N8 137 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 SYNGR1O43759 233 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 SRSF10O75494 262 aaKnown RBP15.28■□□□□ 0.04
CPSF2-203ENST00000554290 DNAJC8O75937 253 aaPredicted RBP15.28■□□□□ 0.04
CPSF2-203ENST00000554290 TSPAN15O95858 294 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 LGALS4P56470 323 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 LRRC75BQ2VPJ9 315 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 NXNL2Q5VZ03 156 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 TMEM42Q69YG0 159 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 TMEM200BQ69YZ2 307 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 C11orf88Q6PI97 169 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 MKXQ8IYA7 352 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 OR4C13Q8NGP0 309 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 FAM110DQ8TAY7 271 aaPredicted RBP15.28■□□□□ 0.04
CPSF2-203ENST00000554290 C17orf50Q8WW18 174 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 NRIP2Q9BQI9 281 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 GPR173Q9NS66 373 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 OR52A1Q9UKL2 312 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 V9GYS6 101 aa15.28■□□□□ 0.04
CPSF2-203ENST00000554290 PQLC2LA1A4F0 135 aa15.27■□□□□ 0.04
CPSF2-203ENST00000554290 DHRS7CA6NNS2 312 aa15.27■□□□□ 0.04
CPSF2-203ENST00000554290 CSF1P09603 554 aa15.27■□□□□ 0.04
CPSF2-203ENST00000554290 KIR2DS4P43632 304 aa15.27■□□□□ 0.04
CPSF2-203ENST00000554290 LY6EQ16553 131 aa15.27■□□□□ 0.04
CPSF2-203ENST00000554290 Q6ZTK2 550 aa15.27■□□□□ 0.04
CPSF2-203ENST00000554290 ASRGL1Q7L266 308 aa15.27■□□□□ 0.04
CPSF2-203ENST00000554290 CALHM1Q8IU99 346 aa15.27■□□□□ 0.04
CPSF2-203ENST00000554290 TCEANCQ8N8B7 351 aa15.27■□□□□ 0.04
CPSF2-203ENST00000554290 TMEM163Q8TC26 289 aa15.27■□□□□ 0.04
CPSF2-203ENST00000554290 RORBQ92753 470 aa15.27■□□□□ 0.04
CPSF2-203ENST00000554290 UTP4Q969X6 686 aaKnown RBP15.27■□□□□ 0.04
CPSF2-203ENST00000554290 KRT84Q9NSB2 600 aa15.27■□□□□ 0.04
CPSF2-203ENST00000554290 CLN6Q9NWW5 311 aa15.27■□□□□ 0.04
CPSF2-203ENST00000554290 SNX5Q9Y5X3 404 aa15.27■□□□□ 0.04
CPSF2-203ENST00000554290 A0A1B0GTI1 187 aa15.26■□□□□ 0.03
CPSF2-203ENST00000554290 CEBPDP49716 269 aaPredicted RBP15.26■□□□□ 0.03
CPSF2-203ENST00000554290 ERVFRD-1P60508 538 aa15.26■□□□□ 0.03
CPSF2-203ENST00000554290 HERPUD1Q15011 391 aa15.26■□□□□ 0.03
CPSF2-203ENST00000554290 AADACL4Q5VUY2 407 aa15.26■□□□□ 0.03
CPSF2-203ENST00000554290 SLX4IPQ5VYV7 408 aa15.26■□□□□ 0.03
CPSF2-203ENST00000554290 BCDIN3DQ7Z5W3 292 aaKnown RBP15.26■□□□□ 0.03
CPSF2-203ENST00000554290 GID4Q8IVV7 300 aa15.26■□□□□ 0.03
CPSF2-203ENST00000554290 OR4M1Q8NGD0 313 aa15.26■□□□□ 0.03
CPSF2-203ENST00000554290 OR14K1Q8NGZ2 314 aa15.26■□□□□ 0.03
CPSF2-203ENST00000554290 SLC7A6OSQ96CW6 309 aaPredicted RBP15.26■□□□□ 0.03
CPSF2-203ENST00000554290 AJUBAQ96IF1 538 aa15.26■□□□□ 0.03
CPSF2-203ENST00000554290 RANBP3Q9H6Z4 567 aaPredicted RBP15.26■□□□□ 0.03
CPSF2-203ENST00000554290 ADGRL4Q9HBW9 690 aa15.26■□□□□ 0.03
CPSF2-203ENST00000554290 OR14J1Q9UGF5 321 aa15.26■□□□□ 0.03
CPSF2-203ENST00000554290 TGP01266 2768 aa15.26■□□□□ 0.03
CPSF2-203ENST00000554290 G3V2T6 193 aa15.25■□□□□ 0.03
CPSF2-203ENST00000554290 MAGEB4O15481 346 aaPredicted RBP15.25■□□□□ 0.03
CPSF2-203ENST00000554290 TK1P04183 234 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms