RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 SIX2Q9NPC8 291 aa3.35□□□□□ -1.87
LRFN5-204ENST00000554171 UQCC1Q9NVA1 299 aa3.35□□□□□ -1.87
LRFN5-204ENST00000554171 MRPL16Q9NX20 251 aaKnown RBP3.35□□□□□ -1.87
LRFN5-204ENST00000554171 MARCH5Q9NX47 278 aa3.35□□□□□ -1.87
LRFN5-204ENST00000554171 SIGLEC8Q9NYZ4 499 aa3.35□□□□□ -1.87
LRFN5-204ENST00000554171 IDI2-AS1Q9NZ38 188 aa3.35□□□□□ -1.87
LRFN5-204ENST00000554171 CCNL1Q9UK58 526 aaPredicted RBP3.35□□□□□ -1.87
LRFN5-204ENST00000554171 FLVCR2Q9UPI3 526 aa3.35□□□□□ -1.87
LRFN5-204ENST00000554171 PAPPA2Q9BXP8 1791 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 ERI3O43414 337 aaKnown RBP3.34□□□□□ -1.87
LRFN5-204ENST00000554171 SYNGR1O43759 233 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 INHAP05111 366 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 DANCRP0C864 163 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 RPL7P18124 248 aaKnown RBP3.34□□□□□ -1.87
LRFN5-204ENST00000554171 GADD45AP24522 165 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 ACRV1P26436 265 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 SOAT1P35610 550 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 CRYBB2P43320 205 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 OR12D2P58182 307 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 CPSF6Q16630 551 aaKnown RBP eCLIP3.34□□□□□ -1.87
LRFN5-204ENST00000554171 GSG1Q2KHT4 349 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 TBC1D28Q2M2D7 210 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 ODF4Q2M2E3 257 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 DCAF4L1Q3SXM0 396 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 CRB2Q5IJ48 1285 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 RTL6Q6ICC9 239 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 ZNF429Q86V71 674 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 C10orf107Q8IVU9 208 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 OR2T12Q8NG77 320 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 CXorf40BQ96DE9 158 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 GINS3Q9BRX5 216 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 C20orf24Q9BUV8 137 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 SLC25A37Q9NYZ2 338 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 NTMQ9P121 344 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 RAI2Q9Y5P3 530 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 PXDNQ92626 1479 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 C2CD4BA6NLJ0 364 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 EML2O95834 649 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 MT-CO3P00414 261 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 CXCL1P09341 107 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 SLC2A2P11168 524 aaPredicted RBP3.34□□□□□ -1.87
LRFN5-204ENST00000554171 IGFBP6P24592 240 aaPredicted RBP3.34□□□□□ -1.87
LRFN5-204ENST00000554171 CCL11P51671 97 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 VAMP7P51809 220 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 FAM3BP58499 235 aaPredicted RBP3.34□□□□□ -1.87
LRFN5-204ENST00000554171 DEFA1P59665 94 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 DEFA3P59666 94 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 RPL15P61313 204 aaKnown RBP3.34□□□□□ -1.87
LRFN5-204ENST00000554171 RHOBP62745 196 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 FAM27E3Q08E93 113 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 ELOBQ15370 118 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 TAF13Q15543 124 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 C3AR1Q16581 482 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 ZNF385BQ569K4 471 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 EMC4Q5J8M3 183 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 TMEM69Q5SWH9 247 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 MOB2Q70IA6 237 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 PPP1R32Q7Z5V6 425 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 C1orf158Q8N1D5 194 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 ZADH2Q8N4Q0 377 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 ZFP41Q8N8Y5 198 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 ADAD2Q8NCV1 583 aaKnown RBP3.34□□□□□ -1.87
LRFN5-204ENST00000554171 MOB3AQ96BX8 217 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 PHYHIPLQ96FC7 376 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 CCDC115Q96NT0 180 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 TBX5Q99593 518 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 MFSD1Q9H3U5 465 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 TP53TG1Q9Y2A0 90 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 NUP98P52948 1817 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 SCN5AQ14524 2016 aa3.34□□□□□ -1.87
LRFN5-204ENST00000554171 A0A1W2PPK0 400 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 PDE6DO43924 150 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 PFN1P07737 140 aaKnown RBP3.34□□□□□ -1.88
LRFN5-204ENST00000554171 TMEM253P0C7T8 217 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 ARSAP15289 507 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 WT1P19544 449 aaPredicted RBP3.34□□□□□ -1.88
LRFN5-204ENST00000554171 SAT1P21673 171 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 BLVRBP30043 206 aaPredicted RBP3.34□□□□□ -1.88
LRFN5-204ENST00000554171 FGF9P31371 208 aaPredicted RBP3.34□□□□□ -1.88
LRFN5-204ENST00000554171 CLDN15P56746 228 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 LINC00310P59036 64 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 RPS23P62266 143 aaKnown RBP3.34□□□□□ -1.88
LRFN5-204ENST00000554171 SELENOWP63302 87 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 IL10RBQ08334 325 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 ST3GAL4Q11206 333 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 LRRC75BQ2VPJ9 315 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 CD300EQ496F6 205 aaPredicted RBP3.34□□□□□ -1.88
LRFN5-204ENST00000554171 TMEM97Q5BJF2 176 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 LRRC10Q5BKY1 277 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 ANKRD16Q6P6B7 361 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 BEST3Q8N1M1 668 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 LINC00116Q8NCU8 138 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 SMARCD1Q96GM5 515 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 MS4A10Q96PG2 267 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 C16orf95Q9H693 158 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 RNF167Q9H6Y7 350 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 AKTIPQ9H8T0 292 aa3.34□□□□□ -1.88
LRFN5-204ENST00000554171 ELL3Q9HB65 397 aaPredicted RBP3.34□□□□□ -1.88
LRFN5-204ENST00000554171 EXOSC4Q9NPD3 245 aaKnown RBP3.34□□□□□ -1.88
LRFN5-204ENST00000554171 MDFICQ9P1T7 246 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms