RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 PURGQ9UJV8 347 aaKnown RBP12.33□□□□□ -0.44
SHMT2-208ENST00000553868 CDC42EP3Q9UKI2 254 aa12.33□□□□□ -0.44
SHMT2-208ENST00000553868 RABL2BQ9UNT1 228 aa12.33□□□□□ -0.44
SHMT2-208ENST00000553868 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-208ENST00000553868 OR5B21A6NL26 309 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 ATP6V1G2-DDX39BF2Z307 99 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 TIMM8AO60220 97 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-208ENST00000553868 BPNT1O95861 308 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 PAHP00439 452 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 ARSBP15848 533 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 ETV6P41212 452 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 PRSS12P56730 875 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 ERVS71-1P61550 626 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 PSG7Q13046 419 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 P2RY14Q15391 338 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 CEACAM21Q3KPI0 293 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 BEX5Q5H9J7 111 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 METAP1DQ6UB28 335 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-208ENST00000553868 BAIAP2L2Q6UXY1 529 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 CCDC190Q86UF4 302 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 LYPD6Q86Y78 171 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 PIAS4Q8N2W9 510 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-208ENST00000553868 BHLHE23Q8NDY6 225 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 OR5A2Q8NGI9 324 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 SYNPRQ8TBG9 265 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 NPRL2Q8WTW4 380 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 RAB40AQ8WXH6 277 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 DIRAS2Q96HU8 199 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 MICU1Q9BPX6 476 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 MIXL1Q9H2W2 232 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 CXorf56Q9H5V9 222 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 CNTD2Q9H8S5 307 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 OR5V1Q9UGF6 321 aa12.32□□□□□ -0.44
SHMT2-208ENST00000553868 MRPS28Q9Y2Q9 187 aaKnown RBP12.32□□□□□ -0.44
SHMT2-208ENST00000553868 FAM230AA0A1W2PPH8 454 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 DPRXA6NFQ7 191 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 ABCD4O14678 606 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 CD3EP07766 207 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 BMP4P12644 408 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 ZNF250P15622 560 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 PTBP1P26599 531 aaKnown RBP eCLIP12.31□□□□□ -0.44
SHMT2-208ENST00000553868 MPV17P39210 176 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 POU3F4P49335 361 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 FABP6P51161 128 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 CLDN12P56749 244 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 KLF3P57682 345 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-208ENST00000553868 BSPH1Q075Z2 132 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 MZT1Q08AG7 82 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 NCMAPQ5T1S8 102 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 AWAT2Q6E213 333 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 SLC22A25Q6T423 547 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 C22orf34Q6ZV56 151 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 ANGPTL5Q86XS5 388 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 OR8G5Q8NG78 346 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 OR51D1Q8NGF3 324 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 OR8S1Q8NH09 359 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 SLC25A28Q96A46 364 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 PTX4Q96A99 478 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 PHF21AQ96BD5 680 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 RTL8AQ9BWD3 113 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 ZNF442Q9H7R0 627 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 PCDHB16Q9NRJ7 776 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 CYSLTR2Q9NS75 346 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 TMEM100Q9NV29 134 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 ZNF701Q9NV72 531 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-208ENST00000553868 NKIRAS2Q9NYR9 191 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 GPR160Q9UJ42 338 aa12.31□□□□□ -0.44
SHMT2-208ENST00000553868 A0A0B4J203 849 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 FABP12A6NFH5 140 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 PAX1P15863 534 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 RAB6AP20340 208 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 CD40LGP29965 261 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 PTGFRP43088 359 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 ALDH3B1P43353 468 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 EVX1P49640 407 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 GNG3P63215 75 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 GPR176Q14439 515 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 C2orf76Q3KRA6 126 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 CNIH2Q6PI25 160 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 OR2W3Q7Z3T1 314 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 MFSD4AQ8N468 514 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 SPERTQ8NA61 448 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 OR4D6Q8NGJ1 314 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 OR5H6Q8NGV6 325 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 TNFAIP8L1Q8WVP5 186 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 OR5P3Q8WZ94 311 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 BORCS5Q969J3 196 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 S100A16Q96FQ6 103 aaKnown RBP12.3□□□□□ -0.44
SHMT2-208ENST00000553868 SPACA5Q96QH8 159 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 BEX2Q9BXY8 128 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 CST11Q9H112 138 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 ABCG5Q9H222 651 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 RHBDL2Q9NX52 303 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 EXTL2Q9UBQ6 330 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 FBLN5Q9UBX5 448 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 POU2F3Q9UKI9 436 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 RAB22AQ9UL26 194 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 ATP23Q9Y6H3 246 aa12.3□□□□□ -0.44
SHMT2-208ENST00000553868 PQLC2LA1A4F0 135 aa12.29□□□□□ -0.44
SHMT2-208ENST00000553868 ZNF780AO75290 641 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms