RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 IGHV3-9P01782 118 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 HLA-HP01893 362 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 AMY2AP04746 511 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 FCER2P06734 321 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 GIPP09681 153 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-221ENST00000553498 PATE4P0C8F1 98 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 GSTT2P0CG29 244 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 CD79AP11912 226 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 PTHLHP12272 177 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 COX5AP20674 150 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 DTYMKP23919 212 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 HOXC12P31275 282 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 TMEM50BP56557 158 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 TAS2R31P59538 309 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 RAP2BP61225 183 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 PDZK1IP1Q13113 114 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 FCN2Q15485 313 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 SURF2Q15527 256 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-221ENST00000553498 ST3GAL2Q16842 350 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 CEACAM21Q3KPI0 293 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 ACSF3Q4G176 576 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-221ENST00000553498 NHLRC3Q5JS37 347 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 PLCXD3Q63HM9 321 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 ELP2Q6IA86 826 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 CRIP3Q6Q6R5 217 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 C3P1Q6ZMU1 363 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 IDO2Q6ZQW0 420 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 SSX8Q7RTT4 187 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 ASCL5Q7RTU5 278 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 SLC36A1Q7Z2H8 476 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 LINC00596Q86U02 117 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 HOGA1Q86XE5 327 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 MKXQ8IYA7 352 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 ZDHHC23Q8IYP9 409 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 BPIFB2Q8N4F0 458 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 OR2AE1Q8NHA4 323 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 MBD3L2Q8NHZ7 208 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-221ENST00000553498 ST8SIA4Q92187 359 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 DACT3Q96B18 629 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-221ENST00000553498 TRIB1Q96RU8 372 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 DHRS9Q9BPW9 319 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 ZNF436Q9C0F3 470 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-221ENST00000553498 KCNK15Q9H427 330 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 PLSCR4Q9NRQ2 329 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 GPR173Q9NS66 373 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 NKIRAS2Q9NYR9 191 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 DKK4Q9UBT3 224 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 PRSS50Q9UI38 385 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 KLK13Q9UKR3 277 aa6.31□□□□□ -1.4
ATXN3-221ENST00000553498 ASCC3Q8N3C0 2202 aaKnown RBP6.31□□□□□ -1.4
ATXN3-221ENST00000553498 SDK1Q7Z5N4 2213 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 SPEGQ15772 3267 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 WDFY3Q8IZQ1 3526 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 A0A0A6YYD4 124 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 FAM230AA0A1W2PPH8 454 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 TMEM82A0PJX8 343 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 PQLC2LA1A4F0 135 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 FAM221AA4D161 298 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 ANKRD30BLA7E2S9 258 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 PYCARD-AS1I3L0S3 204 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 RRP8O43159 456 aaKnown RBP6.3□□□□□ -1.4
ATXN3-221ENST00000553498 OR2A4O95047 310 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 GLAP06280 429 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 ZNF735P0CB33 412 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 CBR1P16152 277 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 GNB3P16520 340 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 BLVRBP30043 206 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-221ENST00000553498 CXADRP78310 365 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 SRSF6Q13247 344 aaKnown RBP6.3□□□□□ -1.4
ATXN3-221ENST00000553498 ARFRP1Q13795 201 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 GRK1Q15835 563 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 GABRA6Q16445 453 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 C3AR1Q16581 482 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 SRSF7Q16629 238 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATXN3-221ENST00000553498 C3orf36Q3SXR2 165 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 TMEM255AQ5JRV8 349 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 PLAC9Q5JTB6 97 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 C11orf88Q6PI97 169 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 FBXW12Q6X9E4 464 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 MOB3CQ70IA8 216 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 ZNF573Q86YE8 665 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 OSR2Q8N2R0 312 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 SLC30A7Q8NEW0 376 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 OR11H7Q8NGC8 314 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 OR8S1Q8NH09 359 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 OR4K15Q8NH41 348 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 GRPEL2Q8TAA5 225 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 ZNF431Q8TF32 576 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-221ENST00000553498 GPR137Q96N19 417 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 FYTTD1Q96QD9 318 aaKnown RBP6.3□□□□□ -1.4
ATXN3-221ENST00000553498 SPACA5Q96QH8 159 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 OR2A7Q96R45 310 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 SLX1AQ9BQ83 275 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 PECRQ9BY49 303 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 ELL3Q9HB65 397 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-221ENST00000553498 SPACA1Q9HBV2 294 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 KCNK7Q9Y2U2 307 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 CSAG2Q9Y5P2 127 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 SDK2Q58EX2 2172 aa6.3□□□□□ -1.4
ATXN3-221ENST00000553498 WIPF3A6NGB9 483 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms