RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 WDR13Q9H1Z4 485 aa6.87□□□□□ -1.31
PCNX1-204ENST00000553428 SMURF1Q9HCE7 757 aa6.87□□□□□ -1.31
PCNX1-204ENST00000553428 AMBNQ9NP70 447 aa6.87□□□□□ -1.31
PCNX1-204ENST00000553428 AASSQ9UDR5 926 aa6.87□□□□□ -1.31
PCNX1-204ENST00000553428 RPUSD1Q9UJJ7 312 aaKnown RBP6.87□□□□□ -1.31
PCNX1-204ENST00000553428 DIMT1Q9UNQ2 313 aaKnown RBP6.87□□□□□ -1.31
PCNX1-204ENST00000553428 CAB39Q9Y376 341 aaPredicted RBP6.87□□□□□ -1.31
PCNX1-204ENST00000553428 EXOSC1Q9Y3B2 195 aaKnown RBP6.87□□□□□ -1.31
PCNX1-204ENST00000553428 KPTNQ9Y664 436 aa6.87□□□□□ -1.31
PCNX1-204ENST00000553428 NIPBLQ6KC79 2804 aaeCLIP6.87□□□□□ -1.31
PCNX1-204ENST00000553428 OR4C45A6NMZ5 311 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 H0YJX3 145 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 TRIM77I1YAP6 450 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 ALX3O95076 343 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 PLATP00750 562 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 MT-ND2P03891 347 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 LIMS3P0CW19 117 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 LIMS4P0CW20 117 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 PGA5P0DJD9 388 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 PIPP12273 146 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-204ENST00000553428 ZNF20P17024 532 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 MYL12AP19105 171 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 AMY2BP19961 511 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 ATP1B3P54709 279 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 NANOS3P60323 173 aaKnown RBP6.86□□□□□ -1.31
PCNX1-204ENST00000553428 FGF12P61328 243 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 ERVK11-1P61568 191 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 ELF3P78545 371 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-204ENST00000553428 SLC34A1Q06495 639 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 PDCD1Q15116 288 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 UBE2V2Q15819 145 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 KRTAP24-1Q3LI83 254 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 KLF17Q5JT82 389 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-204ENST00000553428 METTL11BQ5VVY1 283 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 RBMS3Q6XE24 437 aaKnown RBP6.86□□□□□ -1.31
PCNX1-204ENST00000553428 Q8IYB0 196 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 CMTM4Q8IZR5 234 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 RDH10Q8IZV5 341 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 ZNF561Q8N587 486 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 KIR3DL3Q8N743 410 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 FAM216BQ8N7L0 139 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 ZNF676Q8N7Q3 588 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 LY6G5BQ8NDX9 201 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 OR5T2Q8NGG2 359 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 OR5AK2Q8NH90 309 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 CNIH3Q8TBE1 160 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 ST8SIA4Q92187 359 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 SPSB1Q96BD6 273 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 SEH1LQ96EE3 360 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 BORCS8Q96FH0 119 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 SDSLQ96GA7 329 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 GAFA1Q96PS6 74 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 DCTN5Q9BTE1 182 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 MS4A7Q9GZW8 240 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-204ENST00000553428 CNTD2Q9H8S5 307 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 ZMAT3Q9HA38 289 aaKnown RBP6.86□□□□□ -1.31
PCNX1-204ENST00000553428 SEBOXQ9HB31 216 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-204ENST00000553428 HES4Q9HCC6 221 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 SNTG1Q9NSN8 517 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 SLC25A10Q9UBX3 287 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-204ENST00000553428 ZNF222Q9UK12 451 aa6.86□□□□□ -1.31
PCNX1-204ENST00000553428 IGKV1D-17A0A075B6S4 117 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 TRBV23-1A0A0A0MS06 115 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 TRAV40A0A0B4J280 105 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 FAM230AA0A1W2PPH8 454 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 EFCAB10A6NFE3 127 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 ANKRD65E5RJM6 399 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 SLC1A7O00341 560 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 SYNGR1O43759 233 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 FCN3O75636 299 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 TOX4O94842 621 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 NXPH2O95156 264 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 ZFPL1O95159 310 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 CLIC3O95833 236 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 CYB5AP00167 134 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 KNG1P01042 644 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 PSG2P11465 335 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 MMP9P14780 707 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 ATF1P18846 271 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 GABRA2P47869 451 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 RBP2P50120 134 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 GMFBP60983 142 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 IKZF1Q13422 519 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 SMN1Q16637 294 aaKnown RBP6.85□□□□□ -1.31
PCNX1-204ENST00000553428 DMRTC1Q5HYR2 192 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 GPR157Q5UAW9 335 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 RPL22L1Q6P5R6 122 aaKnown RBP6.85□□□□□ -1.31
PCNX1-204ENST00000553428 METAP1DQ6UB28 335 aaPredicted RBP6.85□□□□□ -1.31
PCNX1-204ENST00000553428 C1orf122Q6ZSJ8 110 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 LHFPL2Q6ZUX7 228 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 SERPINA12Q8IW75 414 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 PHC2Q8IXK0 858 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 MKXQ8IYA7 352 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 PARP16Q8N5Y8 322 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 OR5D14Q8NGL3 314 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 OR13C3Q8NGS6 347 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 OR52N1Q8NH53 320 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 TRMT10AQ8TBZ6 339 aaKnown RBP6.85□□□□□ -1.31
PCNX1-204ENST00000553428 TBC1D15Q8TC07 691 aa6.85□□□□□ -1.31
PCNX1-204ENST00000553428 RPS4Y2Q8TD47 263 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms