RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 ECDO95905 644 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 LIPFP07098 398 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 GNAO1P09471 354 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 PGA5P0DJD9 388 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 ZNF20P17024 532 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 ADRA2CP18825 462 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 AMY2BP19961 511 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 EPHA1P21709 976 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 UBE2V2Q15819 145 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 SMIM21Q3B7S5 101 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 ARMCX4Q5H9R4 360 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 TMPRSS11AQ6ZMR5 421 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 ZNF788Q6ZQV5 615 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 DNAAF1Q8NEP3 725 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 ANGPTL6Q8NI99 470 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 ADAT3Q96EY9 351 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 BORCS8Q96FH0 119 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 TMEM80Q96HE8 168 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 CCL13Q99616 98 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 COMMD4Q9H0A8 199 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 CNOT2Q9NZN8 540 aaKnown RBP12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 OR2AT4A6NND4 320 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 E9PI62 339 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 H0YHG0 523 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 RRP9O43818 475 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 ZFPL1O95159 310 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 ACAA1P09110 424 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 GMFBP60983 142 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 IL24Q13007 206 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 CCDC58Q4VC31 144 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 FAM216BQ8N7L0 139 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 OR13C3Q8NGS6 347 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 OR10AC1Q8NH08 325 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 TRMT10AQ8TBZ6 339 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 NRG4Q8WWG1 115 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 SPSB1Q96BD6 273 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 UPRTQ96BW1 309 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 GAFA1Q96PS6 74 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 NRIP2Q9BQI9 281 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 VCX3BQ9H321 246 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 SNTG1Q9NSN8 517 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 PLCXD1Q9NUJ7 323 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 CHCHD3Q9NX63 227 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 ZNF222Q9UK12 451 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 ARHGAP32A7KAX9 2087 aa12.79□□□□□ -0.36
PRPF40B-211ENST00000551063 A0A0A6YYJ9 748 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 A0A1B0GW55 424 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 FAM230AA0A1W2PPH8 454 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 SIGLEC5O15389 551 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 NDUFB3O43676 98 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 TCF21O43680 179 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 SYNGR1O43759 233 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 FCN3O75636 299 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 DUX4L2P0CJ85 424 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 DUX4L3P0CJ86 424 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 DUX4L4P0CJ87 422 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 DUX4L5P0CJ88 424 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 DUX4L6P0CJ89 424 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 DUX4L7P0CJ90 424 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 ATF1P18846 271 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 PRKACBP22694 351 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 ETV1P50549 477 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 AQP4P55087 323 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 IL13RA1P78552 427 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 CDK5R1Q15078 307 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 LRRC10Q5BKY1 277 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 LAIR2Q6ISS4 152 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 RPL22L1Q6P5R6 122 aaKnown RBP12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 DUX4L9Q6RFH8 374 aaPredicted RBP12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 ACP7Q6ZNF0 438 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 CALHM1Q8IU99 346 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 PNLDC1Q8NA58 520 aaKnown RBP12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 OR5T2Q8NGG2 359 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 OR51A4Q8NGJ6 313 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 OR52N1Q8NH53 320 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 OR5AK2Q8NH90 309 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 RPS4Y2Q8TD47 263 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 NPRL2Q8WTW4 380 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 ST8SIA4Q92187 359 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 GGHQ92820 318 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 FGGYQ96C11 551 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 MED30Q96HR3 178 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 DMRTB1Q96MA1 342 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 DUX4Q9UBX2 424 aa12.78□□□□□ -0.36
PRPF40B-211ENST00000551063 IGKV1D-17A0A075B6S4 117 aa12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 IGKV1-27A0A075B6S5 117 aa12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 IGKV1-9A0A0C4DH69 117 aa12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 TRBV2A0A0J9YWF9 115 aa12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 MT-ND2P03891 347 aa12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 PSG2P11465 335 aa12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 AZGP1P25311 298 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 RBP2P50120 134 aa12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 ATP1B3P54709 279 aa12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 ERVK11-1P61568 191 aa12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 ST3GAL4Q11206 333 aa12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 KRTAP24-1Q3LI83 254 aa12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 KLF17Q5JT82 389 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 OR2G6Q5TZ20 316 aa12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 LHFPL2Q6ZUX7 228 aa12.77□□□□□ -0.37
PRPF40B-211ENST00000551063 BTN2A1Q7KYR7 527 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms