RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 B2RBV5 119 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 J3QT63 122 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 GSC2O15499 205 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 ATP8B1O43520 1251 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 FBXO24O75426 580 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 E2F6O75461 281 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 CST1P01037 141 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 RBP4P02753 201 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 VSIG10L2P0DP72 767 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 OSMP13725 252 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 PRDX2P32119 198 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 MS4A2Q01362 244 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 FAM189A2Q15884 450 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 ZNF829Q3KNS6 432 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-221ENST00000550914 ZNF684Q5T5D7 378 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 PLCXD3Q63HM9 321 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 MOB3CQ70IA8 216 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 ZNF573Q86YE8 665 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 ZNF679Q8IYX0 411 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 C11orf44Q8N8P7 122 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 ASB17Q8WXJ9 295 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 FOXRED1Q96CU9 486 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-221ENST00000550914 ASB9Q96DX5 294 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 CHID1Q9BWS9 393 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 TEX12Q9BXU0 123 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 PBOV1Q9GZY1 135 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 C1orf21Q9H246 121 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 ZNF556Q9HAH1 456 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 GPR84Q9NQS5 396 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 NUFIP1Q9UHK0 495 aaKnown RBP10.41□□□□□ -0.74
PTCH1-221ENST00000550914 ENPP5Q9UJA9 477 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 PIGLQ9Y2B2 252 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 POLDIP2Q9Y2S7 368 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 TBL2Q9Y4P3 447 aaKnown RBP10.41□□□□□ -0.74
PTCH1-221ENST00000550914 TMEM14AQ9Y6G1 99 aa10.41□□□□□ -0.74
PTCH1-221ENST00000550914 DHRS3O75911 302 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 NRASP01111 189 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 FAHP16930 419 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 MPZP25189 248 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 BMXP51813 675 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 RPS7P62081 194 aaKnown RBP10.4□□□□□ -0.74
PTCH1-221ENST00000550914 COMMD2Q86X83 199 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 NDUFA11Q86Y39 141 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 BBS1Q8NFJ9 593 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 OR4F17Q8NGA8 305 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 OR2T27Q8NH04 317 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 OR51E1Q8TCB6 317 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 RPS4Y2Q8TD47 263 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 WIPF2Q8TF74 440 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-221ENST00000550914 OR4F4Q96R69 305 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 NRIP2Q9BQI9 281 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 ZNF702PQ9H963 129 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 SLC25A19Q9HC21 320 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 HES4Q9HCC6 221 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 SERTAD4Q9NUC0 356 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 PITPNC1Q9UKF7 332 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 TCF19Q9Y242 345 aa10.4□□□□□ -0.74
PTCH1-221ENST00000550914 PQLC2LA1A4F0 135 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 DHRS7CA6NNS2 312 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 C17orf98A8MV24 154 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 ODF3BA8MYP8 253 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 DLGAP1O14490 977 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 ALX3O95076 343 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 NXPH2O95156 264 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 TK1P04183 234 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 ANXA8P13928 327 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 PAX6P26367 422 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 HAAOP46952 286 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 DYNLT3P51808 116 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 RIDAP52758 137 aaKnown RBP10.39□□□□□ -0.75
PTCH1-221ENST00000550914 DLX6P56179 175 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 APOFQ13790 326 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 CNN3Q15417 329 aaKnown RBP10.39□□□□□ -0.75
PTCH1-221ENST00000550914 CLVS2Q5SYC1 327 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 TMEM42Q69YG0 159 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 TMEM179BQ7Z7N9 219 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 ADGRG5Q8IZF4 528 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 OR13D1Q8NGV5 346 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 MALSU1Q96EH3 234 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 NSL1Q96IY1 281 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 LRGUKQ96M69 825 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 OR8B4Q96RC9 309 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 TEAD3Q99594 435 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 NKX3-1Q99801 234 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-221ENST00000550914 MOB1AQ9H8S9 216 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 NECAP2Q9NVZ3 263 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 TAS2R1Q9NYW7 299 aa10.39□□□□□ -0.75
PTCH1-221ENST00000550914 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.39□□□□□ -0.75
PTCH1-221ENST00000550914 A6NDX4 124 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 K7N7A8 449 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 GNGT2O14610 69 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 SYNGR1O43759 233 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 CCL3L1P16619 93 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 COX7A1P24310 79 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 HCCSP53701 268 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 LOXL3P58215 753 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 ZNF273Q14593 569 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 ZNF626Q68DY1 528 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 Q6ZSR3 168 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 LHFPL4Q7Z7J7 247 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms