RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 A0A1B0GW55 424 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 TRAPPC2LH3BP13 241 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 TNFRSF13BO14836 293 aaPredicted RBP11.45□□□□□ -0.58
TROAP-213ENST00000550709 TMPRSS2O15393 492 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 OGG1O15527 345 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 NDUFA2O43678 99 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 DUX4L2P0CJ85 424 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 DUX4L3P0CJ86 424 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 DUX4L4P0CJ87 422 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 DUX4L5P0CJ88 424 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 DUX4L6P0CJ89 424 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 DUX4L7P0CJ90 424 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 HNF1AP20823 631 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 SRP14P37108 136 aaKnown RBP11.45□□□□□ -0.58
TROAP-213ENST00000550709 FUT6P51993 359 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 MTCP1P56278 107 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 CNN3Q15417 329 aaKnown RBP11.45□□□□□ -0.58
TROAP-213ENST00000550709 DUX4L9Q6RFH8 374 aaPredicted RBP11.45□□□□□ -0.58
TROAP-213ENST00000550709 UTS2BQ765I0 119 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 CALHM1Q8IU99 346 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 NANOGP1Q8N7R0 232 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 OR4M2Q8NGB6 313 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 OR13C5Q8NGS8 318 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 GHSRQ92847 366 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 RFT1Q96AA3 541 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 TMIGD2Q96BF3 282 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 BORCS8Q96FH0 119 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 SPACA5Q96QH8 159 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 TMEM160Q9NX00 188 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 DUX4Q9UBX2 424 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 RAB26Q9ULW5 256 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 POLDIP2Q9Y2S7 368 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 MALRD1Q5VYJ5 2156 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 ABCA2Q9BZC7 2435 aa11.45□□□□□ -0.58
TROAP-213ENST00000550709 NXPH2O95156 264 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 RPSAP08865 295 aaKnown RBP11.44□□□□□ -0.58
TROAP-213ENST00000550709 PRKACBP22694 351 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 AZGP1P25311 298 aaKnown RBP11.44□□□□□ -0.58
TROAP-213ENST00000550709 GABRA2P47869 451 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 POU3F4P49335 361 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 WNT4P56705 351 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 IKZF1Q13422 519 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 DOC2BQ14184 412 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 WDR25Q64LD2 544 aaPredicted RBP11.44□□□□□ -0.58
TROAP-213ENST00000550709 DMKNQ6E0U4 476 aaPredicted RBP11.44□□□□□ -0.58
TROAP-213ENST00000550709 ZNF841Q6ZN19 808 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 SLC25A26Q70HW3 274 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 FAM216BQ8N7L0 139 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 POC1AQ8NBT0 407 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 OR5D14Q8NGL3 314 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 GPR148Q8TDV2 347 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 SMIM19Q96E16 107 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 ZNF184Q99676 751 aaPredicted RBP11.44□□□□□ -0.58
TROAP-213ENST00000550709 CCDC90BQ9GZT6 254 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 ZCCHC4Q9H5U6 513 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 C7orf69Q9H7B7 122 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 SMURF1Q9HCE7 757 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 NLKQ9UBE8 527 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 LPAR3Q9UBY5 353 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 ZNF281Q9Y2X9 895 aa11.44□□□□□ -0.58
TROAP-213ENST00000550709 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.44□□□□□ -0.58
TROAP-213ENST00000550709 LOC105371242A0A075B767 164 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 OR2AT4A6NND4 320 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 A8MXK9 166 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 DVL1O14640 695 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 RGS10O43665 173 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 AVPP01185 164 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 MT-ND2P03891 347 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 PGA5P0DJD9 388 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 SELLP14151 372 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 SRD5A1P18405 259 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 CELP19835 753 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 CPT2P23786 658 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 CRHBPP24387 322 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 EEF1B2P24534 225 aaKnown RBP11.43□□□□□ -0.58
TROAP-213ENST00000550709 RBP2P50120 134 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 ATP1B3P54709 279 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 TAS2R43P59537 309 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 SLC35A2P78381 396 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 STUMQ69YW2 141 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 RNF144BQ7Z419 303 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 SERPINA12Q8IW75 414 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 FGFRL1Q8N441 504 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 RPS4Y2Q8TD47 263 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 ST8SIA4Q92187 359 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 SLAMF9Q96A28 289 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 C12orf43Q96C57 262 aaKnown RBP11.43□□□□□ -0.58
TROAP-213ENST00000550709 POM121Q96HA1 1249 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 OPALINQ96PE5 141 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 OR5M11Q96RB7 305 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 MND1Q9BWT6 205 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 CDCA4Q9BXL8 241 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 TMPRSS13Q9BYE2 586 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 PKIBQ9C010 78 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 Q9H521 79 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 DUSP21Q9H596 190 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 TANC2Q9HCD6 1990 aa11.43□□□□□ -0.58
TROAP-213ENST00000550709 IGKV1D-17A0A075B6S4 117 aa11.42□□□□□ -0.58
TROAP-213ENST00000550709 NKX6-3A6NJ46 265 aa11.42□□□□□ -0.58
TROAP-213ENST00000550709 C22orf46C9J442 243 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms