RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 METTL11BQ5VVY1 283 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 DHRS7BQ6IAN0 325 aaPredicted RBP2.86□□□□□ -1.95
LIMA1-206ENST00000550611 OR2T2Q6IF00 324 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 C11orf88Q6PI97 169 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 METAP1DQ6UB28 335 aaPredicted RBP2.86□□□□□ -1.95
LIMA1-206ENST00000550611 HIST2H3AQ71DI3 136 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 BTN2A1Q7KYR7 527 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 HIST3H2AQ7L7L0 130 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 HDDC2Q7Z4H3 204 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 RANBP3LQ86VV4 465 aaPredicted RBP2.86□□□□□ -1.95
LIMA1-206ENST00000550611 CALHM3Q86XJ0 350 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 FUNDC1Q8IVP5 155 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 NKAIN4Q8IVV8 208 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 SLC30A8Q8IWU4 369 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 C1orf87Q8N0U7 546 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 OR8H2Q8N162 312 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 LYG1Q8N1E2 194 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 CLDN22Q8N7P3 220 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 Q8N7P7 452 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 SMYD1Q8NB12 490 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 SCCPDHQ8NBX0 429 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 OR10AD1Q8NGE0 317 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 OR9I1Q8NGQ6 314 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 MUC7Q8TAX7 377 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 FNDC8Q8TC99 324 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 PIFOQ8TCI5 191 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 ADAMTS16Q8TE57 1224 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 NSMAFQ92636 917 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 HIST1H2ACQ93077 130 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 RASD2Q96D21 266 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 HARBI1Q96MB7 349 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 RBP7Q96R05 134 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 SRSF8Q9BRL6 282 aaKnown RBP2.86□□□□□ -1.95
LIMA1-206ENST00000550611 MMP28Q9H239 520 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 TXNIPQ9H3M7 391 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 RAD21L1Q9H4I0 556 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 IKZF5Q9H5V7 419 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 KRCC1Q9NPI7 259 aaPredicted RBP2.86□□□□□ -1.95
LIMA1-206ENST00000550611 POLE4Q9NR33 117 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 TMEM100Q9NV29 134 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 ARGLU1Q9NWB6 273 aaPredicted RBP2.86□□□□□ -1.95
LIMA1-206ENST00000550611 VAPAQ9P0L0 249 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 STX18Q9P2W9 335 aaKnown RBP2.86□□□□□ -1.95
LIMA1-206ENST00000550611 ERVK-18Q9QC07 812 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 KAAG1Q9UBP8 84 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 ATPIF1Q9UII2 106 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 SLC7A7Q9UM01 511 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 KPTNQ9Y664 436 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 CEPT1Q9Y6K0 416 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 U3KQK5 164 aa2.86□□□□□ -1.95
LIMA1-206ENST00000550611 V9GYY5 206 aaPredicted RBP2.86□□□□□ -1.95
LIMA1-206ENST00000550611 KMT2AQ03164 3969 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 IGHV3-64DA0A0J9YX35 117 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 A0A1B0GVI7 797 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 LINC00854A0A1B0GVQ3 168 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 RPS10-NUDT3A0A1W2PQS6 291 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 HTR3EA5X5Y0 456 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 LRRC30A6NM36 301 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 TRPC5OSA6NMA1 111 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 CPSF4LA6NMK7 179 aaKnown RBP2.85□□□□□ -1.95
LIMA1-206ENST00000550611 KPNA4O00629 521 aaPredicted RBP2.85□□□□□ -1.95
LIMA1-206ENST00000550611 FBP2O00757 339 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 CTDSP2O14595 271 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 VCYO14598 125 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 DVL1O14640 695 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 UBDO15205 165 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 SGCEO43556 437 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 NDUFA2O43678 99 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 OR10H3O60404 316 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 SNNO75324 88 aaPredicted RBP2.85□□□□□ -1.95
LIMA1-206ENST00000550611 OR2C1O95371 312 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 ECDO95905 644 aaPredicted RBP2.85□□□□□ -1.95
LIMA1-206ENST00000550611 LHBP01229 141 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 HOXB5P09067 269 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 FBP1P09467 338 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 NR2C1P13056 603 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 TMEM11P17152 192 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 GABRB1P18505 474 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 PPIBP23284 216 aaKnown RBP2.85□□□□□ -1.95
LIMA1-206ENST00000550611 MYF6P23409 242 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 GABRA5P31644 462 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 RBM34P42696 430 aaKnown RBP2.85□□□□□ -1.95
LIMA1-206ENST00000550611 HTR5AP47898 357 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 RGS6P49758 472 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 BLVRAP53004 296 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 MFAP4P55083 255 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 RPL27P61353 136 aaKnown RBP2.85□□□□□ -1.95
LIMA1-206ENST00000550611 NCALDP61601 193 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 LSM6P62312 80 aaKnown RBP2.85□□□□□ -1.95
LIMA1-206ENST00000550611 CD47Q08722 323 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 RCN1Q15293 331 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 AANATQ16613 207 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 CDONQ4KMG0 1287 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 LRRC23Q53EV4 343 aaPredicted RBP2.85□□□□□ -1.95
LIMA1-206ENST00000550611 C6orf141Q5SZD1 244 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 TEX36Q5VZQ5 186 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 SPSB3Q6PJ21 355 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 DLEU7Q6UYE1 221 aa2.85□□□□□ -1.95
LIMA1-206ENST00000550611 GLDNQ6ZMI3 551 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms