RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 PCDHB10Q9UN67 800 aa9.32□□□□□ -0.92
RAB5B-208ENST00000550283 DIMT1Q9UNQ2 313 aaKnown RBP9.32□□□□□ -0.92
RAB5B-208ENST00000550283 NOP16Q9Y3C1 178 aaKnown RBP9.32□□□□□ -0.92
RAB5B-208ENST00000550283 TPRKBQ9Y3C4 175 aa9.32□□□□□ -0.92
RAB5B-208ENST00000550283 IGKV1D-17A0A075B6S4 117 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 TRAV20A0A0B4J274 112 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 ADAM20O43506 726 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 MTRF1O75570 445 aaKnown RBP9.31□□□□□ -0.92
RAB5B-208ENST00000550283 INMTO95050 263 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 FSTL3O95633 263 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 ISG15P05161 165 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 IRF2P14316 349 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 JUNBP17275 347 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-208ENST00000550283 PITPNBP48739 271 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 CCR9P51686 369 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 ACTA2P62736 377 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 GNG3P63215 75 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 ACTG2P63267 376 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 CHRFAM7AQ494W8 412 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 KLF17Q5JT82 389 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-208ENST00000550283 ZBTB37Q5TC79 503 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 WDR25Q64LD2 544 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-208ENST00000550283 DCDC5Q6ZRR9 648 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 AHSA2Q719I0 299 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 KCTD20Q7Z5Y7 419 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 C1orf87Q8N0U7 546 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 OR5A2Q8NGI9 324 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 GATAD2BQ8WXI9 593 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 NEIL1Q96FI4 390 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-208ENST00000550283 SPACA5Q96QH8 159 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 CCDC90BQ9GZT6 254 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 SHARPINQ9H0F6 387 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 INPP5EQ9NRR6 644 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 PLCXD1Q9NUJ7 323 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 IL36RNQ9UBH0 155 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 POLR3KQ9Y2Y1 108 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-208ENST00000550283 PCDHGB1Q9Y5G3 927 aa9.31□□□□□ -0.92
RAB5B-208ENST00000550283 FAM230AA0A1W2PPH8 454 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 TMEM210A6NLX4 147 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 SNTNA6NMZ2 147 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 DHRS7CA6NNS2 312 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 PLATP00750 562 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 FSHBP01225 129 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 UBCP0CG48 685 aaKnown RBP9.3□□□□□ -0.92
RAB5B-208ENST00000550283 CALCBP10092 127 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 ZNF12P17014 697 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 DCKP27707 260 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 HAAOP46952 286 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 DLX1P56177 255 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 PRB3Q04118 309 aaPredicted RBP9.3□□□□□ -0.92
RAB5B-208ENST00000550283 CDK5R1Q15078 307 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 MUC20Q8N307 709 aaPredicted RBP9.3□□□□□ -0.92
RAB5B-208ENST00000550283 CD177Q8N6Q3 437 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 ANGPTL6Q8NI99 470 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 RFT1Q96AA3 541 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 TMEM80Q96HE8 168 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 GAFA1Q96PS6 74 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 SSBP3Q9BWW4 388 aaPredicted RBP9.3□□□□□ -0.92
RAB5B-208ENST00000550283 BEX2Q9BXY8 128 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 CHST5Q9GZS9 411 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 ELL3Q9HB65 397 aaPredicted RBP9.3□□□□□ -0.92
RAB5B-208ENST00000550283 MTCH1Q9NZJ7 389 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 MIOXQ9UGB7 285 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 ZNF222Q9UK12 451 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 CDC42EP3Q9UKI2 254 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 CAB39Q9Y376 341 aaPredicted RBP9.3□□□□□ -0.92
RAB5B-208ENST00000550283 INSIG2Q9Y5U4 225 aa9.3□□□□□ -0.92
RAB5B-208ENST00000550283 IGHV3OR16-10A0A075B7F0 116 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 IGHV2-70DA0A0C4DH43 119 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 IGKV1-12A0A0C4DH73 117 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 PNMA8CA0A1B0GUJ8 204 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 OR5B21A6NL26 309 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 PTGES3LE9PB15 166 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 ZNF701M0R085 212 aaPredicted RBP9.29□□□□□ -0.92
RAB5B-208ENST00000550283 DVL1O14640 695 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 OGG1O15527 345 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 MRPS14O60783 128 aaKnown RBP9.29□□□□□ -0.92
RAB5B-208ENST00000550283 RGS9O75916 674 aaPredicted RBP9.29□□□□□ -0.92
RAB5B-208ENST00000550283 IGKV1D-12P01611 117 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 FAM157CP0CG43 387 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 PGA5P0DJD9 388 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 PSG2P11465 335 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 PIPP12273 146 aaPredicted RBP9.29□□□□□ -0.92
RAB5B-208ENST00000550283 MPZP25189 248 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 NPBWR2P48146 333 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 SOX2P48431 317 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 TGM4P49221 684 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 ERVK11-1P61568 191 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 RPS11P62280 158 aaKnown RBP eCLIP9.29□□□□□ -0.92
RAB5B-208ENST00000550283 GNB2P62879 340 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 LSAMPQ13449 338 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 INSL4Q14641 139 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 DGUOKQ16854 277 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 ESCO2Q56NI9 601 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 TMEM244Q5VVB8 128 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 DCAF12L2Q5VW00 463 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 SPARTQ8N0X7 666 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 FTMTQ8N4E7 242 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 SVOPQ8N4V2 548 aa9.29□□□□□ -0.92
RAB5B-208ENST00000550283 ZNF676Q8N7Q3 588 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms