RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 MTRF1O75570 445 aaKnown RBP11.2□□□□□ -0.62
NUP188-211ENST00000550219 SC5DO75845 299 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 IGHV4-38-2P0DP08 117 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 IRF2P14316 349 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 ACKR3P25106 362 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 GABRA5P31644 462 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 TGFBR2P37173 567 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 DDOSTP39656 456 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 RPL5P46777 297 aaKnown RBP11.2□□□□□ -0.62
NUP188-211ENST00000550219 TRAM1Q15629 374 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 ODF4Q2M2E3 257 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 GFOD2Q3B7J2 385 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 ZBTB37Q5TC79 503 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 BTNL3Q6UXE8 466 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 UNQ9370/PRO34162Q6UXP9 181 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 MRPL21Q7Z2W9 205 aaKnown RBP11.2□□□□□ -0.62
NUP188-211ENST00000550219 C19orf18Q8NEA5 215 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 OR8B3Q8NGG8 313 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 OR51A4Q8NGJ6 313 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 OR13F1Q8NGS4 319 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 SGMS2Q8NHU3 365 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 GPR148Q8TDV2 347 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 YIPF6Q96EC8 236 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 NEIL1Q96FI4 390 aaPredicted RBP11.2□□□□□ -0.62
NUP188-211ENST00000550219 OR8B2Q96RD0 313 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 SLC30A2Q9BRI3 323 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 POLR3KQ9Y2Y1 108 aaPredicted RBP11.2□□□□□ -0.62
NUP188-211ENST00000550219 NBEAL1Q6ZS30 2694 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 IGHV2-70DA0A0C4DH43 119 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 A0A1B0GWJ7 208 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 CD300LBA8K4G0 201 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 WNT2P09544 360 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 HKR1P10072 659 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 PRTN3P24158 256 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 PSMA1P25786 263 aaKnown RBP11.19□□□□□ -0.62
NUP188-211ENST00000550219 MAP2K3P46734 347 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 RPS25P62851 125 aaKnown RBP11.19□□□□□ -0.62
NUP188-211ENST00000550219 PRAMEF6Q5VXH4 476 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 CD200R1LQ6Q8B3 271 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 TMEM91Q6ZNR0 172 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 NLRC3Q7RTR2 1065 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 C1orf87Q8N0U7 546 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 CSNK2A3Q8NEV1 391 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 OR13C5Q8NGS8 318 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 TMIGD2Q96BF3 282 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 C10orf35Q96D05 121 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 FAM71F1Q96KD3 344 aaPredicted RBP11.19□□□□□ -0.62
NUP188-211ENST00000550219 C1orf147Q96MC9 270 aaPredicted RBP11.19□□□□□ -0.62
NUP188-211ENST00000550219 TMEM246Q9BRR3 403 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 UFSP2Q9NUQ7 469 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 TMEM100Q9NV29 134 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 MIOXQ9UGB7 285 aa11.19□□□□□ -0.62
NUP188-211ENST00000550219 SOX21Q9Y651 276 aaPredicted RBP11.19□□□□□ -0.62
NUP188-211ENST00000550219 TRBV5-7A0A0A0MS05 114 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 MDFIC2A0A1B0GVS7 189 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 GGT3PA6NGU5 568 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 GALP22466 123 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 CD80P33681 288 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 PITPNBP48739 271 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 HOXA4Q00056 320 aaPredicted RBP11.18□□□□□ -0.62
NUP188-211ENST00000550219 RIPPLY1Q0D2K3 151 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 FOXL1Q12952 345 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 ZNF404Q494X3 552 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 Q499Y3 187 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 TMEM42Q69YG0 159 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 COMMD2Q86X83 199 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 BOLLQ8N9W6 283 aaKnown RBP11.18□□□□□ -0.62
NUP188-211ENST00000550219 OR56B2PQ8NGI1 322 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 OR11L1Q8NGX0 322 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 PHYHIPQ92561 330 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 TAF15Q92804 592 aaKnown RBP eCLIP11.18□□□□□ -0.62
NUP188-211ENST00000550219 TMED9Q9BVK6 235 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 ZMAT3Q9HA38 289 aaKnown RBP11.18□□□□□ -0.62
NUP188-211ENST00000550219 TMEM165Q9HC07 324 aa11.18□□□□□ -0.62
NUP188-211ENST00000550219 TRDV1A0A1B0GX56 115 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 ZNF879B4DU55 563 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 H3BSH0 61 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 WIPF1O43516 503 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 GATBO75879 557 aaKnown RBP11.17□□□□□ -0.62
NUP188-211ENST00000550219 SERPINA3P01011 423 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 CST4P01036 141 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 OCM2P0CE71 109 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 CD36P16671 472 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 PMELP40967 661 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 FABP5Q01469 135 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 PAX8Q06710 450 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 BLMHQ13867 455 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 OR8G1Q15617 311 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 ACSM3Q53FZ2 586 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 LYPD2Q6UXB3 125 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 PARP16Q8N5Y8 322 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 OR13C3Q8NGS6 347 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 RAB40AQ8WXH6 277 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 THRSPQ92748 146 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 TMEM203Q969S6 136 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 SLC25A28Q96A46 364 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 ADAT3Q96EY9 351 aaPredicted RBP11.17□□□□□ -0.62
NUP188-211ENST00000550219 TECTBQ96PL2 329 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 DERL3Q96Q80 235 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 NUDT16L1Q9BRJ7 211 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms