RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 USP42Q9H9J4 1324 aaKnown RBP2.52□□□□□ -2.01
SNRPF-202ENST00000549580 PLIN3O60664 434 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 CCNE2O96020 404 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 LINC00869P0C866 280 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 HSPD1P10809 573 aaKnown RBP2.52□□□□□ -2.01
SNRPF-202ENST00000549580 ME2P23368 584 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 PSMB5P28074 263 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 HTR2BP41595 481 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 LAMTOR4Q0VGL1 99 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 BSXQ3C1V8 233 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 FBXL19-AS1Q494R0 122 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 TTC32Q5I0X7 151 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 ZFP1Q6P2D0 407 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 ERO1BQ86YB8 467 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 ZNF695Q8IW36 515 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 MNS1Q8NEH6 495 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 TTLQ8NG68 377 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 OR2Y1Q8NGV0 311 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 ESR2Q92731 530 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 SLC25A46Q96AG3 418 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 S100PBPQ96BU1 408 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 MRPL48Q96GC5 212 aaKnown RBP2.52□□□□□ -2.01
SNRPF-202ENST00000549580 SNF8Q96H20 258 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 ALS2CR12Q96Q35 445 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 OR2M4Q96R27 311 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 SDHCQ99643 169 aaPredicted RBP2.52□□□□□ -2.01
SNRPF-202ENST00000549580 TMED9Q9BVK6 235 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 NLE1Q9NVX2 485 aaPredicted RBP2.52□□□□□ -2.01
SNRPF-202ENST00000549580 DDIT4Q9NX09 232 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 OPN4Q9UHM6 478 aa2.52□□□□□ -2.01
SNRPF-202ENST00000549580 NOSIPQ9Y314 301 aaKnown RBP2.52□□□□□ -2.01
SNRPF-202ENST00000549580 LRPPRCP42704 1394 aaKnown RBP2.51□□□□□ -2.01
SNRPF-202ENST00000549580 IGKV6-21A0A0C4DH24 114 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 A0A1B0GTI1 187 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 ISPDA4D126 451 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 BET1O15155 118 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 NDUFS5O43920 106 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 SCN2BO60939 215 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 NDUFS6O75380 124 aaKnown RBP2.51□□□□□ -2.01
SNRPF-202ENST00000549580 ZNF324O75467 553 aaPredicted RBP2.51□□□□□ -2.01
SNRPF-202ENST00000549580 CCNKO75909 580 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 CDK14O94921 469 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 SLC35E2BP0CK96 405 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 PRSS3P35030 304 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 CRATP43155 626 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 MAGEA3P43357 314 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 MAGEA6P43360 314 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 PFN3P60673 137 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 SKP1P63208 163 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 EBI3Q14213 229 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 FLOT2Q14254 428 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 LINC00483Q53H64 154 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 C5orf47Q569G3 176 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 YIF1BQ5BJH7 314 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 AP1ARQ63HQ0 302 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 HBMQ6B0K9 141 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 FAM71E1Q6IPT2 247 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 UGT2A3Q6UWM9 527 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 TIFABQ6ZNK6 161 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 SSX7Q7RTT5 188 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 CYP4Z1Q86W10 505 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 CD302Q8IX05 232 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 GAPTQ8N292 157 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 NECAP1Q8NC96 275 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 OR7G1Q8NGA0 311 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 FRZBQ92765 325 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 RBMXL1Q96E39 390 aaKnown RBP2.51□□□□□ -2.01
SNRPF-202ENST00000549580 RILPQ96NA2 401 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 RNF5Q99942 180 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 CHCHD7Q9BUK0 85 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 NUDT9Q9BW91 350 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 METTL8Q9H825 291 aaKnown RBP2.51□□□□□ -2.01
SNRPF-202ENST00000549580 IFT46Q9NQC8 304 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 SIRT7Q9NRC8 400 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 ANXA10Q9UJ72 324 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 FARSAQ9Y285 508 aaKnown RBP2.51□□□□□ -2.01
SNRPF-202ENST00000549580 C15orf41Q9Y2V0 281 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 LRRC42Q9Y546 428 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 URGCP-MRPS24S4R325 110 aa2.51□□□□□ -2.01
SNRPF-202ENST00000549580 NPHP4O75161 1426 aaPredicted RBP2.51□□□□□ -2.01
SNRPF-202ENST00000549580 CENPVL3A0A0U1RRI6 287 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 F8VZ95 297 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 SULT1C2O00338 296 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 SGCEO43556 437 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 GATBO75879 557 aaKnown RBP2.5□□□□□ -2.01
SNRPF-202ENST00000549580 TNFAIP8O95379 198 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 BRI3O95415 125 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 MRPL3P09001 348 aaKnown RBP2.5□□□□□ -2.01
SNRPF-202ENST00000549580 ZNF806P0C7X5 589 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 IL3RAP26951 378 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 RPA3P35244 121 aaPredicted RBP2.5□□□□□ -2.01
SNRPF-202ENST00000549580 TUFMP49411 452 aaKnown RBP2.5□□□□□ -2.01
SNRPF-202ENST00000549580 RAB38P57729 211 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 ADIGQ0VDE8 80 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 SLAMF1Q13291 335 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 TPBGQ13641 420 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 COTL1Q14019 142 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 TRAM1Q15629 374 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 TRIP13Q15645 432 aaPredicted RBP2.5□□□□□ -2.01
SNRPF-202ENST00000549580 Q6ZT83 130 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms