RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 NANOS1Q8WY41 292 aaKnown RBP8.62□□□□□ -1.03
RAB5B-206ENST00000549505 DVL3Q92997 716 aaPredicted RBP8.62□□□□□ -1.03
RAB5B-206ENST00000549505 MARVELD3Q96A59 401 aa8.62□□□□□ -1.03
RAB5B-206ENST00000549505 IFT46Q9NQC8 304 aa8.62□□□□□ -1.03
RAB5B-206ENST00000549505 DLL3Q9NYJ7 618 aa8.62□□□□□ -1.03
RAB5B-206ENST00000549505 ZNF69Q9UC07 566 aa8.62□□□□□ -1.03
RAB5B-206ENST00000549505 MPC1Q9Y5U8 109 aa8.62□□□□□ -1.03
RAB5B-206ENST00000549505 TRBV6-7A0A0A0MS04 114 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 IGKV1-12A0A0C4DH73 117 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 OR2AT4A6NND4 320 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 M0QYG6 137 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 NKX2-8O15522 239 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 IGKV1D-12P01611 117 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 RPA2P15927 270 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 HRH1P35367 487 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 DHRS2Q13268 280 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 ATP1A1-AS1Q5TC04 95 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 AADACL3Q5VUY0 350 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 TEX261Q6UWH6 196 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 C17orf78Q8N4C9 275 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 C12orf45Q8N5I9 185 aaPredicted RBP8.61□□□□□ -1.03
RAB5B-206ENST00000549505 PRRG4Q9BZD6 226 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 EIF3KQ9UBQ5 218 aaKnown RBP8.61□□□□□ -1.03
RAB5B-206ENST00000549505 KCNMB2Q9Y691 235 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 U3KQ87 197 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 COL6A3P12111 3177 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 C9orf170A2RU37 121 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 LINC00862A6NCI5 91 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 AHRRA9YTQ3 701 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 CRHP06850 196 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 RPS2P15880 293 aaKnown RBP8.61□□□□□ -1.03
RAB5B-206ENST00000549505 MTCP1P56278 107 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 ZNF345Q14585 488 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 FAM76BQ5HYJ3 339 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 TMEM211Q6ICI0 200 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 GVQW1Q8N7I0 195 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 PKIBQ9C010 78 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 FGF23Q9GZV9 251 aaPredicted RBP8.61□□□□□ -1.03
RAB5B-206ENST00000549505 OBP2BQ9NPH6 170 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 GPR173Q9NS66 373 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 NKIRAS2Q9NYR9 191 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 SLC7A11Q9UPY5 501 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 ARHGAP21Q5T5U3 1957 aa8.61□□□□□ -1.03
RAB5B-206ENST00000549505 A0A1W2PP11 408 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 RFPL4AA6NLU0 287 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 MCRIP1C9JLW8 97 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 F5H5P2 479 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 RFPL4AL1F8VTS6 287 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 SMLR1H3BR10 107 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 F10P00742 488 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 WNT2P09544 360 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 UCP3P55916 312 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 CXADRP78310 365 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 FGL1Q08830 312 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 C2orf68Q2NKX9 166 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 OR4S1Q8NGB4 309 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 OR2T35Q8NGX2 323 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 OR6K3Q8NGY3 331 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 GPER1Q99527 375 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 PLSCR4Q9NRQ2 329 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 MED9Q9NWA0 146 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 C1QTNF9BB2RNN3 333 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 RBM11P57052 281 aaKnown RBP8.6□□□□□ -1.03
RAB5B-206ENST00000549505 TMEM128Q5BJH2 165 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 INO80CQ6PI98 192 aaPredicted RBP8.6□□□□□ -1.03
RAB5B-206ENST00000549505 Q6ZT83 130 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 OSR2Q8N2R0 312 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 CHST4Q8NCG5 386 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 OR2AE1Q8NHA4 323 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 ZNF775Q96BV0 537 aaPredicted RBP8.6□□□□□ -1.03
RAB5B-206ENST00000549505 BORCS8Q96FH0 119 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 SPACA5Q96QH8 159 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 BANF2Q9H503 90 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 MEIS3P1A6NDR6 274 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 OR5B21A6NL26 309 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 CGAP01215 116 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 FOXG1P55316 489 aaPredicted RBP8.6□□□□□ -1.03
RAB5B-206ENST00000549505 MALLQ13021 153 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 MPV17LQ2QL34 196 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 EIF2S3LQ2VIR3 472 aaKnown RBP8.6□□□□□ -1.03
RAB5B-206ENST00000549505 OR2A2Q6IF42 318 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 RTN4RL2Q86UN3 420 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 OR52B4Q8NGK2 314 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 HPSE2Q8WWQ2 592 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 OR5P3Q8WZ94 311 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 TMEM230Q96A57 120 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 RTBDNQ9BSG5 229 aaPredicted RBP8.6□□□□□ -1.03
RAB5B-206ENST00000549505 SEBOXQ9HB31 216 aaPredicted RBP8.6□□□□□ -1.03
RAB5B-206ENST00000549505 HSPB11Q9Y547 144 aa8.6□□□□□ -1.03
RAB5B-206ENST00000549505 MBD3L4A6NDZ8 208 aaPredicted RBP8.59□□□□□ -1.03
RAB5B-206ENST00000549505 MBD3L3A6NE82 208 aaPredicted RBP8.59□□□□□ -1.03
RAB5B-206ENST00000549505 MBD3L5A6NJ08 208 aaPredicted RBP8.59□□□□□ -1.03
RAB5B-206ENST00000549505 PATE4P0C8F1 98 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 BLVRBP30043 206 aaPredicted RBP8.59□□□□□ -1.03
RAB5B-206ENST00000549505 RFC3P40938 356 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 WNT5AP41221 380 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 SEC61A1P61619 476 aaKnown RBP8.59□□□□□ -1.03
RAB5B-206ENST00000549505 RAB1AP62820 205 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 IL15RAQ13261 267 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 SLC22A6Q4U2R8 563 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms