RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	TAS2R9	Q9NYW1	312 aa		2.55	□□□□□ -2
RPAP3-205	ENST00000548211	SENP1	Q9P0U3	644 aa		2.55	□□□□□ -2
RPAP3-205	ENST00000548211	ABCD2	Q9UBJ2	740 aa		2.55	□□□□□ -2
RPAP3-205	ENST00000548211	NUP50	Q9UKX7	468 aa		2.55	□□□□□ -2
RPAP3-205	ENST00000548211	ZNF346	Q9UL40	294 aa	Known RBP	2.55	□□□□□ -2
RPAP3-205	ENST00000548211	PIGL	Q9Y2B2	252 aa		2.55	□□□□□ -2
RPAP3-205	ENST00000548211	PLLP	Q9Y342	182 aa		2.55	□□□□□ -2
RPAP3-205	ENST00000548211	OARD1	Q9Y530	152 aa		2.55	□□□□□ -2
RPAP3-205	ENST00000548211	ASB4	Q9Y574	426 aa		2.55	□□□□□ -2
RPAP3-205	ENST00000548211	SLC25A15	Q9Y619	301 aa		2.55	□□□□□ -2
RPAP3-205	ENST00000548211	NPTN	Q9Y639	398 aa		2.55	□□□□□ -2
RPAP3-205	ENST00000548211	BIRC6	Q9NR09	4857 aa		2.55	□□□□□ -2
RPAP3-205	ENST00000548211	TET2	Q6N021	2002 aa	Predicted RBP	2.54	□□□□□ -2
RPAP3-205	ENST00000548211	PPIAL4E	A0A075B759	164 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211		A0A0A6YYD5	115 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	PPIAL4C	A0A0B4J2A2	164 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211		A0A0J9YW62	118 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	CLPSL1	A2RUU4	121 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	SNTN	A6NMZ2	147 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	ATP6V1G2-DDX39B	F2Z307	99 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	C3orf84	H3BNL1	204 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211		H3BTX0	84 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	hCG_2039718	K7EN88	272 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	SAP18	O00422	153 aa	Known RBP	2.54	□□□□□ -2
RPAP3-205	ENST00000548211	PLPP1	O14494	284 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	PPIH	O43447	177 aa	Known RBP	2.54	□□□□□ -2
RPAP3-205	ENST00000548211	FADS1	O60427	444 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	TPST2	O60704	377 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	SH3BGRL	O75368	114 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	MRPL33	O75394	65 aa	Known RBP	2.54	□□□□□ -2
RPAP3-205	ENST00000548211	SEMA3D	O95025	777 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	ANGPTL1	O95841	491 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	CT62	P0C5K7	136 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	OR4A8	P0C604	315 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	HSMCR30	P0CW71	290 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	CT45A8	P0DMV1	189 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	CT45A9	P0DMV2	189 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	PPIAL4F	P0DN26	164 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	NCK1	P16333	377 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	SRM	P19623	302 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	NPR2	P20594	1047 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	DUT	P33316	252 aa	Known RBP	2.54	□□□□□ -2
RPAP3-205	ENST00000548211	HTR2B	P41595	481 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	EMD	P50402	254 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	RAG2	P55895	527 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	TRAP1	Q12931	704 aa	Known RBP	2.54	□□□□□ -2
RPAP3-205	ENST00000548211	CEACAM7	Q14002	265 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	OPCML	Q14982	345 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	HEPACAM	Q14CZ8	416 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	TGFBI	Q15582	683 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	CT45A2	Q5DJT8	189 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	ANKRD22	Q5VYY1	191 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	TMEM53	Q6P2H8	277 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	RNASEK	Q6P5S7	137 aa	Known RBP	2.54	□□□□□ -2
RPAP3-205	ENST00000548211	TMEM107	Q6UX40	140 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	PEX26	Q7Z412	305 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	2.54	□□□□□ -2
RPAP3-205	ENST00000548211	MMGT1	Q8N4V1	131 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	OR4C5	Q8NGB2	326 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	CLDND2	Q8NHS1	167 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	LRRC20	Q8TCA0	184 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	ZNF675	Q8TD23	568 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	MAIP1	Q8WWC4	291 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	RDH5	Q92781	318 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	RPL3L	Q92901	407 aa	Known RBP	2.54	□□□□□ -2
RPAP3-205	ENST00000548211	LRRC58	Q96CX6	371 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	TIMD4	Q96H15	378 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	AKR1E2	Q96JD6	320 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	ZNF317	Q96PQ6	595 aa	Predicted RBP	2.54	□□□□□ -2
RPAP3-205	ENST00000548211	SERPINI1	Q99574	410 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	NAT9	Q9BTE0	207 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	ZNF442	Q9H7R0	627 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	NECAP2	Q9NVZ3	263 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	TREM2	Q9NZC2	230 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	MAT2B	Q9NZL9	334 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	STX18	Q9P2W9	335 aa	Known RBP	2.54	□□□□□ -2
RPAP3-205	ENST00000548211	ZNF639	Q9UID6	485 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	ETV7	Q9Y603	341 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	DOCK11	Q5JSL3	2073 aa		2.54	□□□□□ -2
RPAP3-205	ENST00000548211	TRAV25	A0A0B4J276	109 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	FAM168B	A1KXE4	195 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	RNF222	A6NCQ9	220 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	RPL37AP8	A6NKH3	93 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211		H3BNH8	94 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211		M0R233	179 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	ARPC1B	O15143	372 aa	Known RBP	2.53	□□□□□ -2
RPAP3-205	ENST00000548211	ZSCAN12	O43309	604 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	FOXH1	O75593	365 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	UPK3A	O75631	287 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	KRTAP5-8	O75690	187 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	NDUFA7	O95182	113 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	NUDT14	O95848	222 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	GSTA1	P08263	222 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	PPIAL4G	P0DN37	164 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	UMPS	P11172	480 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	PGAM1	P18669	254 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	GSTM3	P21266	225 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	FKBP2	P26885	142 aa	Known RBP	2.53	□□□□□ -2
RPAP3-205	ENST00000548211	LCN1	P31025	176 aa		2.53	□□□□□ -2
RPAP3-205	ENST00000548211	MPI	P34949	423 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms