RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 ZYG11BQ9C0D3 744 aa0.78□□□□□ -2.28
CEP290-204ENST00000547926 VSIRQ9H7M9 311 aa0.78□□□□□ -2.28
CEP290-204ENST00000547926 BRCA1P38398 1863 aaKnown RBP0.78□□□□□ -2.28
CEP290-204ENST00000547926 NUP205Q92621 2012 aa0.78□□□□□ -2.28
CEP290-204ENST00000547926 CPS1P31327 1500 aa0.78□□□□□ -2.28
CEP290-204ENST00000547926 CHD9Q3L8U1 2897 aa0.78□□□□□ -2.29
CEP290-204ENST00000547926 TET3O43151 1660 aa0.78□□□□□ -2.29
CEP290-204ENST00000547926 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 H7C0C1 242 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 CCNB2O95067 398 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 CPSF4O95639 269 aaKnown RBP0.77□□□□□ -2.29
CEP290-204ENST00000547926 NRASP01111 189 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 HRASP01112 189 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 KRASP01116 189 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 MAS1P04201 325 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 EIF2S2P20042 333 aaKnown RBP0.77□□□□□ -2.29
CEP290-204ENST00000547926 PCK1P35558 622 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 FUSP35637 526 aaKnown RBP eCLIP0.77□□□□□ -2.29
CEP290-204ENST00000547926 ATP5OP48047 213 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 TRMT5Q32P41 509 aaKnown RBP0.77□□□□□ -2.29
CEP290-204ENST00000547926 KRTAP25-1Q3LHN0 102 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 LIN9Q5TKA1 542 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 SPESP1Q6UW49 350 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 OR56A4Q8NGH8 313 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 ZNF606Q8WXB4 792 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 NRGNQ92686 78 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 NLE1Q9NVX2 485 aaPredicted RBP0.77□□□□□ -2.29
CEP290-204ENST00000547926 CAB39Q9Y376 341 aaPredicted RBP0.77□□□□□ -2.29
CEP290-204ENST00000547926 ADGBQ8N7X0 1667 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 WNK1Q9H4A3 2382 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 TSPAN11A1L157 253 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 IZUMO1RA6ND01 250 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 GOLGA6L4A6NEF3 574 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 CCDC22O60826 627 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 OR2F2O95006 317 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 IL3RAP26951 378 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 MPIP34949 423 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 RFC3P40938 356 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 NBL1P41271 181 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 PPP1CAP62136 330 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 PDZD11Q5EBL8 140 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 TMEM31Q5JXX7 168 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 LDLRAD2Q5SZI1 272 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 MFSD14CQ5VZR4 134 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 LRRC66Q68CR7 880 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 MORN3Q6PF18 240 aaPredicted RBP0.77□□□□□ -2.29
CEP290-204ENST00000547926 RBPMSQ93062 196 aaKnown RBP0.77□□□□□ -2.29
CEP290-204ENST00000547926 OTUB2Q96DC9 234 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 TEAD3Q99594 435 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 SND1-IT1Q9HBX3 110 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 ZNF160Q9HCG1 818 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 RAB22AQ9UL26 194 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 RAB23Q9ULC3 237 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 MCTS1Q9ULC4 181 aaKnown RBP0.77□□□□□ -2.29
CEP290-204ENST00000547926 ZNF257Q9Y2Q1 563 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 CRB1P82279 1406 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 ZCCHC6Q5VYS8 1495 aaKnown RBP0.77□□□□□ -2.29
CEP290-204ENST00000547926 CAMSAP1Q5T5Y3 1602 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 ZCCHC11Q5TAX3 1644 aaKnown RBP0.77□□□□□ -2.29
CEP290-204ENST00000547926 F8P00451 2351 aa0.77□□□□□ -2.29
CEP290-204ENST00000547926 RNF17Q9BXT8 1623 aaKnown RBP0.76□□□□□ -2.29
CEP290-204ENST00000547926 FRMPD1Q5SYB0 1578 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 FAM135AQ9P2D6 1515 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 FAM135BQ49AJ0 1406 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 MROH7Q68CQ1 1323 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 DNALI1O14645 258 aaPredicted RBP0.76□□□□□ -2.29
CEP290-204ENST00000547926 ERI3O43414 337 aaKnown RBP0.76□□□□□ -2.29
CEP290-204ENST00000547926 THRAP10827 490 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 OTX1P32242 354 aaPredicted RBP0.76□□□□□ -2.29
CEP290-204ENST00000547926 OR1G1P47890 313 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 FMODQ06828 376 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 CPTPQ5TA50 214 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 FAM104BQ5XKR9 115 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 FA2HQ7L5A8 372 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 TAS2R42Q7RTR8 314 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 ZFP62Q8NB50 900 aaPredicted RBP0.76□□□□□ -2.29
CEP290-204ENST00000547926 OR4D6Q8NGJ1 314 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 OR51F2Q8NH61 342 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 ZNF420Q8TAQ5 688 aaPredicted RBP0.76□□□□□ -2.29
CEP290-204ENST00000547926 RAB1CQ92928 201 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 CSPG4P5Q96PW8 444 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 PANX1Q96RD7 426 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 SFXN3Q9BWM7 321 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 SLC22A7Q9Y694 548 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 ROBO1Q9Y6N7 1651 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 DIP2AQ14689 1571 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 LAMC3Q9Y6N6 1575 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 PLB1Q6P1J6 1458 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 CACNA1HO95180 2353 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 TEX46H3BTG2 121 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 CTNSO60931 367 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 CIB2O75838 187 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 OR5AC1P0C628 307 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 UQCRFS1P47985 274 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 OR12D2P58182 307 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 ZNF33AQ06730 810 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 TSC22D1Q15714 1073 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 ARMC12Q5T9G4 340 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 PDPNQ86YL7 162 aa0.76□□□□□ -2.29
CEP290-204ENST00000547926 OR8K3Q8NH51 312 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms