RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 KRT84Q9NSB2 600 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 RASL12Q9NYN1 266 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 MRM2Q9UI43 246 aaKnown RBP10.9□□□□□ -0.66
CPSF6-204ENST00000547486 VPREB3Q9UKI3 123 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 SLC22A13Q9Y226 551 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 CAB39Q9Y376 341 aaPredicted RBP10.9□□□□□ -0.66
CPSF6-204ENST00000547486 V9GYS6 101 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 PQLC2LA1A4F0 135 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 LOC110117498-PIK3R3F6TDL0 507 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 G3V2T6 193 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 PAX6P26367 422 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 PRDX2P32119 198 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 POLR2IP36954 125 aaKnown RBP10.89□□□□□ -0.67
CPSF6-204ENST00000547486 HAAOP46952 286 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 CEBPDP49716 269 aaPredicted RBP10.89□□□□□ -0.67
CPSF6-204ENST00000547486 ZNF684Q5T5D7 378 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 NXNL2Q5VZ03 156 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 NCR3LG1Q68D85 454 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 TMEM200BQ69YZ2 307 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 KDM4DQ6B0I6 523 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 GDPGP1Q6ZNW5 385 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 Q6ZSR3 168 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 AMIGO2Q86SJ2 522 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 C11orf42Q8N5U0 333 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 OR14K1Q8NGZ2 314 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 C16orf95Q9H693 158 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 CLN6Q9NWW5 311 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 H2AFY2Q9P0M6 372 aaPredicted RBP10.89□□□□□ -0.67
CPSF6-204ENST00000547486 OR52A1Q9UKL2 312 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 GTF2A1LQ9UNN4 478 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 R4GMQ9 66 aa10.89□□□□□ -0.67
CPSF6-204ENST00000547486 SLC22A31A6NKX4 558 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 H0YAE9 185 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 NOS1APO75052 506 aaPredicted RBP10.88□□□□□ -0.67
CPSF6-204ENST00000547486 TSPAN9O75954 239 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 PGA5P0DJD9 388 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 ACSM1Q08AH1 577 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 OCLNQ16625 522 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 CLVS2Q5SYC1 327 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 ASRGL1Q7L266 308 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 ANGPTL5Q86XS5 388 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 CALHM1Q8IU99 346 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 MKXQ8IYA7 352 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 FAM185AQ8N0U4 392 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 OR4M1Q8NGD0 313 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 PPP1R35Q8TAP8 253 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 LRTOMTQ8WZ04 291 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 RORBQ92753 470 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 MNTQ99583 582 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 RBM4BQ9BQ04 359 aaKnown RBP10.88□□□□□ -0.67
CPSF6-204ENST00000547486 NRIP2Q9BQI9 281 aa10.88□□□□□ -0.67
CPSF6-204ENST00000547486 TRBV23-1A0A0A0MS06 115 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 ZNF670-ZNF695F2Z2N8 137 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 J3QT63 122 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 DLGAP1O14490 977 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 RPP14O95059 124 aaKnown RBP10.87□□□□□ -0.67
CPSF6-204ENST00000547486 APOL3O95236 402 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 PAHP00439 452 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 CAPZA1P52907 286 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 EGR3Q06889 387 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 BLMHQ13867 455 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 ODF4Q2M2E3 257 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 BCL2L15Q5TBC7 163 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 DHRS7BQ6IAN0 325 aaPredicted RBP10.87□□□□□ -0.67
CPSF6-204ENST00000547486 SLC35E4Q6ICL7 350 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 ZNF573Q86YE8 665 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 BEND2Q8NDZ0 799 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 OR51G2Q8NGK0 314 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 OR5D13Q8NGL4 314 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 TBX5Q99593 518 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 CIB1Q99828 191 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 GABARAPL1Q9H0R8 117 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 HES4Q9HCC6 221 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 SF3B6Q9Y3B4 125 aaKnown RBP10.87□□□□□ -0.67
CPSF6-204ENST00000547486 AP4S1Q9Y587 144 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 SNX5Q9Y5X3 404 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 CMYA5Q8N3K9 4069 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 VWFP04275 2813 aa10.87□□□□□ -0.67
CPSF6-204ENST00000547486 A0A1W2PQL4 384 aaPredicted RBP10.86□□□□□ -0.67
CPSF6-204ENST00000547486 MEGF11A6BM72 1044 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 BTBD17A6NE02 478 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 F8VVB4 439 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 F8VWA3 439 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 H3BSH0 61 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 H3BUX3 64 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 ANGPTL7O43827 346 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 NXPH2O95156 264 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 CCL3L1P16619 93 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 CCL1P22362 96 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 MPZP25189 248 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 FASP25445 335 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 TGFBR2P37173 567 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 ACTR3P61158 418 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 ERVK11-1P61568 191 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 RPL31P62899 125 aaKnown RBP10.86□□□□□ -0.67
CPSF6-204ENST00000547486 SMIM21Q3B7S5 101 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 MIDNQ504T8 468 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 PDLIM3Q53GG5 364 aaPredicted RBP10.86□□□□□ -0.67
CPSF6-204ENST00000547486 CATSPERDQ86XM0 798 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 ZDHHC13Q8IUH4 622 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms