RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 PDCD10Q9BUL8 212 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 EHFQ9NZC4 300 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 PTTG3PQ9NZH4 202 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 KLF13Q9Y2Y9 288 aaPredicted RBP9.6□□□□□ -0.87
CUX1-212ENST00000547394 IGF2RP11717 2491 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 hCG_38984A0A1B0GV85 526 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 DHRS7CA6NNS2 312 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 MPTX1A8MV57 137 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 L7N2F9 121 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 M0R233 179 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 KNG1P01042 644 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 SERPINA5P05154 406 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 PPP3CBP16298 524 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 GLRA1P23415 457 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 IL32P24001 234 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 OR3A3P47888 321 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 MECP2P51608 486 aaKnown RBP9.6□□□□□ -0.87
CUX1-212ENST00000547394 SUN5Q8TC36 379 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 STARD10Q9Y365 291 aa9.6□□□□□ -0.87
CUX1-212ENST00000547394 TRGV5A0A0B4J1U4 118 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 PLSCR5A0PG75 271 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 ZSCAN5BA6NJL1 495 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 OR2A4O95047 310 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 CHRM2P08172 466 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 CELA3BP08861 270 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 HOXA4Q00056 320 aaPredicted RBP9.59□□□□□ -0.87
CUX1-212ENST00000547394 OPCMLQ14982 345 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 RIPPLY2Q5TAB7 128 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 ALKAL2Q6UX46 152 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 SLC25A26Q70HW3 274 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 OR2W3Q7Z3T1 314 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 OR13G1Q8NGZ3 307 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 MED30Q96HR3 178 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 ZNF488Q96MN9 340 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 OR2A7Q96R45 310 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 PRRT1Q99946 306 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 SLC25A21Q9BQT8 299 aaPredicted RBP9.59□□□□□ -0.87
CUX1-212ENST00000547394 FGF23Q9GZV9 251 aaPredicted RBP9.59□□□□□ -0.87
CUX1-212ENST00000547394 ARL6Q9H0F7 186 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 ASCL3Q9NQ33 180 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 MRPS18CQ9Y3D5 142 aaKnown RBP9.59□□□□□ -0.87
CUX1-212ENST00000547394 SPTBN4Q9H254 2564 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 TPPPO94811 219 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 NFYAP23511 347 aaPredicted RBP9.59□□□□□ -0.87
CUX1-212ENST00000547394 OR3A2P47893 321 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 RBP2P50120 134 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 GPM6AP51674 278 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 CAPZA1P52907 286 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 RAP2BP61225 183 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 ZFP62Q8NB50 900 aaPredicted RBP9.59□□□□□ -0.87
CUX1-212ENST00000547394 OR5H2Q8NGV7 314 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 OR51F2Q8NH61 342 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 SULT4A1Q9BR01 284 aa9.59□□□□□ -0.87
CUX1-212ENST00000547394 C9orf170A2RU37 121 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 ADAP1O75689 374 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 LYZL6O75951 148 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 APOC1P02654 83 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 SSBP1Q04837 148 aaKnown RBP9.58□□□□□ -0.88
CUX1-212ENST00000547394 TCF15Q12870 199 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 MEF2DQ14814 521 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 CCDC107Q8WV48 283 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 WDYHV1Q96HA8 205 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 C5orf66Q9H5L9 145 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 RDH8Q9NYR8 311 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 EMC3Q9P0I2 261 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 INTS1Q8N201 2190 aaKnown RBP9.58□□□□□ -0.88
CUX1-212ENST00000547394 IGKV3D-15A0A087WSY6 115 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 TRAV14DV4A0A0A6YYC5 116 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 SLC22A20A6NK97 555 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 MCRIP1C9JLW8 97 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 IL18BPO95998 194 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 SELEP16581 610 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 ZBTB25P24278 435 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 TNFSF10P50591 281 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 ATP1B3P54709 279 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 PCBD1P61457 104 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 SEC61A1P61619 476 aaKnown RBP9.58□□□□□ -0.88
CUX1-212ENST00000547394 CLVS2Q5SYC1 327 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 FAM109AQ8N4B1 249 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 SLAMF9Q96A28 289 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 CLEC4MQ9H2X3 399 aaPredicted RBP9.58□□□□□ -0.88
CUX1-212ENST00000547394 AK3Q9UIJ7 227 aa9.58□□□□□ -0.88
CUX1-212ENST00000547394 OR5H14A6NHG9 310 aa9.57□□□□□ -0.88
CUX1-212ENST00000547394 EFSO43281 561 aa9.57□□□□□ -0.88
CUX1-212ENST00000547394 GSTP1P09211 210 aaKnown RBP9.57□□□□□ -0.88
CUX1-212ENST00000547394 FAM89BQ8N5H3 189 aa9.57□□□□□ -0.88
CUX1-212ENST00000547394 CNEP1R1Q8N9A8 125 aa9.57□□□□□ -0.88
CUX1-212ENST00000547394 Q96M66 194 aa9.57□□□□□ -0.88
CUX1-212ENST00000547394 LIME1Q9H400 295 aa9.57□□□□□ -0.88
CUX1-212ENST00000547394 ACKR4Q9NPB9 350 aa9.57□□□□□ -0.88
CUX1-212ENST00000547394 FBLN5Q9UBX5 448 aa9.57□□□□□ -0.88
CUX1-212ENST00000547394 ST3GAL6Q9Y274 331 aa9.57□□□□□ -0.88
CUX1-212ENST00000547394 GTF3C1Q12789 2109 aa9.57□□□□□ -0.88
CUX1-212ENST00000547394 ESPL1Q14674 2120 aa9.57□□□□□ -0.88
CUX1-212ENST00000547394 TLN1Q9Y490 2541 aaKnown RBP9.57□□□□□ -0.88
CUX1-212ENST00000547394 FIGNL2A6NMB9 653 aa9.57□□□□□ -0.88
CUX1-212ENST00000547394 FOXI3A8MTJ6 420 aaPredicted RBP9.57□□□□□ -0.88
CUX1-212ENST00000547394 CDRT15L2A8MXV6 281 aa9.57□□□□□ -0.88
CUX1-212ENST00000547394 H3BUI4 141 aa9.57□□□□□ -0.88
CUX1-212ENST00000547394 OR7C1O76099 320 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms