RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ELF3P78545 371 aaPredicted RBP13.15□□□□□ -0.3
DDX54-204ENST00000546898 IKZF1Q13422 519 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 CNN3Q15417 329 aaKnown RBP13.15□□□□□ -0.3
DDX54-204ENST00000546898 GPR157Q5UAW9 335 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 ZNF691Q5VV52 312 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 METTL11BQ5VVY1 283 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 TTC23Q5W5X9 447 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 OR5T2Q8NGG2 359 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 HAVCR2Q8TDQ0 301 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 PELI1Q96FA3 418 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 C4orf36Q96KX1 117 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 WDFY2Q96P53 400 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 PKIBQ9C010 78 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 AMBNQ9NP70 447 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 ERVK13-1Q9NX77 482 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 ZNF222Q9UK12 451 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 MYRFQ9Y2G1 1151 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 FBN3Q75N90 2809 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 A6NIN4 97 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 J3QLW9 94 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 SYNGR1O43759 233 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 TOX4O94842 621 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 RPSAP08865 295 aaKnown RBP13.14□□□□□ -0.31
DDX54-204ENST00000546898 ACAA1P09110 424 aaPredicted RBP13.14□□□□□ -0.31
DDX54-204ENST00000546898 PSG2P11465 335 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 ZNF19P17023 458 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 PEX2P28328 305 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 FUT6P51993 359 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 CAV3P56539 151 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 NANOS3P60323 173 aaKnown RBP13.14□□□□□ -0.31
DDX54-204ENST00000546898 IL24Q13007 206 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 PDCD1Q15116 288 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 LRRC36Q1X8D7 754 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 ACP7Q6ZNF0 438 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 LHFPL3Q86UP9 236 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 SIGLECL1Q8N7X8 197 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.14□□□□□ -0.31
DDX54-204ENST00000546898 LY6G5BQ8NDX9 201 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 SETD9Q8NE22 299 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 C8orf46Q8TAG6 207 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 FAM216AQ8WUB2 273 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 PCGF1Q9BSM1 259 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 DCTN5Q9BTE1 182 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 JAM3Q9BX67 310 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 SIRPDQ9H106 197 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 CNTD2Q9H8S5 307 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 ZMAT3Q9HA38 289 aaKnown RBP13.14□□□□□ -0.31
DDX54-204ENST00000546898 FRRS1LQ9P0K9 344 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 SLC25A10Q9UBX3 287 aaPredicted RBP13.14□□□□□ -0.31
DDX54-204ENST00000546898 HHLA2Q9UM44 414 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 KPTNQ9Y664 436 aa13.14□□□□□ -0.31
DDX54-204ENST00000546898 IGKV1D-17A0A075B6S4 117 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 IRGMA1A4Y4 181 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 H3BSH0 61 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 CASQ2O14958 399 aaPredicted RBP13.13□□□□□ -0.31
DDX54-204ENST00000546898 WBP4O75554 376 aaKnown RBP13.13□□□□□ -0.31
DDX54-204ENST00000546898 IL18R1Q13478 541 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 ALKBH1Q13686 389 aaKnown RBP13.13□□□□□ -0.31
DDX54-204ENST00000546898 UBE2V2Q15819 145 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 DGUOKQ16854 277 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 UTS2BQ765I0 119 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 CALHM1Q8IU99 346 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 FGFRL1Q8N441 504 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 KIR3DL3Q8N743 410 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 ZDHHC22Q8N966 263 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 DNAAF1Q8NEP3 725 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 OR52I1Q8NGK6 324 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 TRMT10AQ8TBZ6 339 aaKnown RBP13.13□□□□□ -0.31
DDX54-204ENST00000546898 BORCS8Q96FH0 119 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 SDSLQ96GA7 329 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 TBX15Q96SF7 602 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 NRIP2Q9BQI9 281 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 ZNF649Q9BS31 505 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 HES4Q9HCC6 221 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 FGF20Q9NP95 211 aaPredicted RBP13.13□□□□□ -0.31
DDX54-204ENST00000546898 ESM1Q9NQ30 184 aa13.13□□□□□ -0.31
DDX54-204ENST00000546898 IGHV3OR16-10A0A075B7F0 116 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 FAM230AA0A1W2PPH8 454 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 OR4C45A6NMZ5 311 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 NXPH2O95156 264 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 SFTPBP07988 381 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 SELLP14151 372 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 ZNF20P17024 532 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 GABRA2P47869 451 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 UBA52P62987 128 aaKnown RBP13.12□□□□□ -0.31
DDX54-204ENST00000546898 OGFRL1Q5TC84 451 aaPredicted RBP13.12□□□□□ -0.31
DDX54-204ENST00000546898 CMTM4Q8IZR5 234 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 RDH10Q8IZV5 341 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 BCL6BQ8N143 479 aaPredicted RBP13.12□□□□□ -0.31
DDX54-204ENST00000546898 DHRSXQ8N5I4 330 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 ZNF676Q8N7Q3 588 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 NPRL2Q8WTW4 380 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 CYGBQ8WWM9 190 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 H1FXQ92522 213 aaKnown RBP13.12□□□□□ -0.31
DDX54-204ENST00000546898 ZNF488Q96MN9 340 aa13.12□□□□□ -0.31
DDX54-204ENST00000546898 TRBV23-1A0A0A0MS06 115 aa13.11□□□□□ -0.31
DDX54-204ENST00000546898 SLC1A7O00341 560 aa13.11□□□□□ -0.31
DDX54-204ENST00000546898 CCDC159P0C7I6 412 aa13.11□□□□□ -0.31
DDX54-204ENST00000546898 NDUFB7P17568 137 aa13.11□□□□□ -0.31
DDX54-204ENST00000546898 DCKP27707 260 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms