RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 MIOXQ9UGB7 285 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 A0A1W2PPK0 400 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 C3orf80F5H4A9 247 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 CCRL2O00421 344 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 NOS1APO75052 506 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-213ENST00000546820 RHBDL1O75783 438 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 GLRA1P23415 457 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 GZMKP49863 264 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 KISS1Q15726 138 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 ZNF404Q494X3 552 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 FAM201AQ5SY85 155 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 CYB5R2Q6BCY4 276 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 ZNF529Q6P280 563 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 SLC25A26Q70HW3 274 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 SATL1Q86VE3 508 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 PNLDC1Q8NA58 520 aaKnown RBP11.55□□□□□ -0.56
PTCH1-213ENST00000546820 POC1AQ8NBT0 407 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 MAPK1IP1LQ8NDC0 245 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 TMIGD2Q96BF3 282 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 C12orf43Q96C57 262 aaKnown RBP11.55□□□□□ -0.56
PTCH1-213ENST00000546820 GPER1Q99527 375 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 TMEM246Q9BRR3 403 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 SLITRK2Q9H156 845 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 ZNF665Q9H7R5 613 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 NOX4Q9NPH5 578 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 OTOGQ6ZRI0 2925 aa11.55□□□□□ -0.56
PTCH1-213ENST00000546820 CSMD1Q96PZ7 3565 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 IGKV1-27A0A075B6S5 117 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 A0A096LNT2 108 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 TRAPPC2LH3BP13 241 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 SYNGR1O43759 233 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 ARL6IP5O75915 188 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 RGS9O75916 674 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-213ENST00000546820 INMTO95050 263 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 PGA5P0DJD9 388 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 TMEM225BP0DP42 221 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 IGFBP3P17936 291 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-213ENST00000546820 SRMP19623 302 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 FSTP19883 344 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 CD80P33681 288 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 POU3F4P49335 361 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 LMO4P61968 165 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 RPS25P62851 125 aaKnown RBP11.54□□□□□ -0.56
PTCH1-213ENST00000546820 PDZK1IP1Q13113 114 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 NEDD8Q15843 81 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 TMEM249Q2WGJ8 235 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 HSD17B12Q53GQ0 312 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 SYT6Q5T7P8 510 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-213ENST00000546820 TEX36Q5VZQ5 186 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 DCDC5Q6ZRR9 648 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 NLRC3Q7RTR2 1065 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 CALHM1Q8IU99 346 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 CDH26Q8IXH8 852 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 Q8IYB0 196 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 SAXO1Q8IYX7 474 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 OR51F2Q8NH61 342 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 CEP19Q96LK0 163 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 S100A13Q99584 98 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 PATZ1Q9HBE1 687 aaKnown RBP11.54□□□□□ -0.56
PTCH1-213ENST00000546820 RHOFQ9HBH0 211 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 SF3B6Q9Y3B4 125 aaKnown RBP11.54□□□□□ -0.56
PTCH1-213ENST00000546820 MAST4O15021 2626 aa11.54□□□□□ -0.56
PTCH1-213ENST00000546820 WNT9BO14905 357 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 SC5DO75845 299 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 NXPH2O95156 264 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 PLATP00750 562 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 IGHV2-5P01817 119 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 GALP22466 123 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 ZNF93P35789 620 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-213ENST00000546820 RBMXP38159 391 aaKnown RBP11.53□□□□□ -0.56
PTCH1-213ENST00000546820 GMFBP60983 142 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 HNRNPA0Q13151 305 aaKnown RBP11.53□□□□□ -0.56
PTCH1-213ENST00000546820 SMIM21Q3B7S5 101 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 DDI2Q5TDH0 399 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 FIP1L1Q6UN15 594 aaKnown RBP11.53□□□□□ -0.56
PTCH1-213ENST00000546820 BIVMQ86UB2 503 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 FAM90A1Q86YD7 464 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 ZSCAN4Q8NAM6 433 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-213ENST00000546820 C19orf18Q8NEA5 215 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 OR8B3Q8NGG8 313 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 OR52N4Q8NGI2 321 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 OR51A2Q8NGJ7 313 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 NEIL1Q96FI4 390 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-213ENST00000546820 SPACA5Q96QH8 159 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 OR8B2Q96RD0 313 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 DNTTIP1Q9H147 329 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 PCDHB16Q9NRJ7 776 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 NDUFB11Q9NX14 153 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 NLKQ9UBE8 527 aa11.53□□□□□ -0.56
PTCH1-213ENST00000546820 TRAV8-7A0A075B6U6 113 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 IGHV3OR15-7A0A075B7D8 119 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 OR2AT4A6NND4 320 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 CEACAM18A8MTB9 384 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 B4DSR2 109 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 GABRPO00591 440 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 PIN1P1O15428 100 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 GYPAP02724 150 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 MAS1P04201 325 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 WNT2P09544 360 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 UCHL1P09936 223 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms