RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 OR51B5Q9H339 312 aa1.27□□□□□ -2.21
CCDC38-204ENST00000546816 RDH14Q9HBH5 336 aa1.27□□□□□ -2.21
CCDC38-204ENST00000546816 FAM60AQ9NP50 221 aa1.27□□□□□ -2.21
CCDC38-204ENST00000546816 TUBG2Q9NRH3 451 aa1.27□□□□□ -2.21
CCDC38-204ENST00000546816 VAX2Q9UIW0 290 aa1.27□□□□□ -2.21
CCDC38-204ENST00000546816 CES1P1Q9UKY3 287 aa1.27□□□□□ -2.21
CCDC38-204ENST00000546816 PSME2Q9UL46 239 aa1.27□□□□□ -2.21
CCDC38-204ENST00000546816 RHBDD3Q9Y3P4 386 aa1.27□□□□□ -2.21
CCDC38-204ENST00000546816 ZNF608Q9ULD9 1512 aaPredicted RBP1.26□□□□□ -2.21
CCDC38-204ENST00000546816 IGHV6-1A0A0B4J1U7 121 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 NCF1BA6NI72 391 aaPredicted RBP1.26□□□□□ -2.21
CCDC38-204ENST00000546816 NCF1CA8MVU1 366 aaPredicted RBP1.26□□□□□ -2.21
CCDC38-204ENST00000546816 SYNGR2O43760 224 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 HSBP1O75506 76 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 IGKV1-39P01597 117 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 IGKV1D-39P04432 117 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 KLK1P06870 262 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 SLC35G6P0C7Q6 338 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 RALBP11234 206 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 GABRR2P28476 465 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 YWHAEP62258 255 aaKnown RBP1.26□□□□□ -2.21
CCDC38-204ENST00000546816 ATP5G2Q06055 141 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 TSC22D1Q15714 1073 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 ZNF141Q15928 474 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 KLHL40Q2TBA0 621 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 HIKESHIQ53FT3 197 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 C3orf22Q8N5N4 141 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 PROKR2Q8NFJ6 384 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 OR10Z1Q8NGY1 313 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 OR8K3Q8NH51 312 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 ZNF707Q96C28 371 aaPredicted RBP1.26□□□□□ -2.21
CCDC38-204ENST00000546816 CERS2Q96G23 380 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 TMEM175Q9BSA9 504 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 OR2AG1Q9H205 316 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 ARV1Q9H2C2 271 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 NCOR1P1Q9H4R4 102 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 CA10Q9NS85 328 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 DDX18Q9NVP1 670 aaKnown RBP1.26□□□□□ -2.21
CCDC38-204ENST00000546816 DDX19BQ9UMR2 479 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 LTBP2Q14767 1821 aa1.26□□□□□ -2.21
CCDC38-204ENST00000546816 PLEKHG2Q9H7P9 1386 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 A0A0G2JMP0 313 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 A0A0X1KG70 313 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 GMNCA6NCL1 334 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 HACD1B0YJ81 288 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 ZNF701M0R085 212 aaPredicted RBP1.25□□□□□ -2.21
CCDC38-204ENST00000546816 SLC31A1O15431 190 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 PSCAO43653 123 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 LCA5LO95447 670 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 TTC4O95801 387 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 SNRPAP09012 282 aaKnown RBP1.25□□□□□ -2.21
CCDC38-204ENST00000546816 PMCHP20382 165 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 CFHR2P36980 270 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 RGS6P49758 472 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 NUDT2P50583 147 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 FOXA1P55317 472 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 LCN2P80188 198 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 SLC9A3R2Q15599 337 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 LDLRAD2Q5SZI1 272 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 ULK3Q6PHR2 472 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 OR2W3Q7Z3T1 314 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 COMTD1Q86VU5 262 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 CPNE9Q8IYJ1 553 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 OR2M7Q8NG81 312 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 OR8A1Q8NGG7 326 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 PIH1D2Q8WWB5 315 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 TMEM234Q8WY98 164 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 OR8D1Q8WZ84 308 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 NAPGQ99747 312 aaPredicted RBP1.25□□□□□ -2.21
CCDC38-204ENST00000546816 IL22Q9GZX6 179 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 BLZF1Q9H2G9 400 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 NDRG2Q9UN36 371 aaKnown RBP1.25□□□□□ -2.21
CCDC38-204ENST00000546816 BAHCC1Q9P281 2608 aa1.25□□□□□ -2.21
CCDC38-204ENST00000546816 SBNO1A3KN83 1393 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 LOC102724200A0A096LPH7 203 aaPredicted RBP1.24□□□□□ -2.21
CCDC38-204ENST00000546816 H3BQ85 93 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 TRDMT1O14717 391 aaKnown RBP1.24□□□□□ -2.21
CCDC38-204ENST00000546816 GCGP01275 180 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 SRMP19623 302 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 ARL2P36404 184 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 PAFAH1B2P68402 229 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 SLC35A1P78382 337 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 LINC00303Q3SY05 128 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 SLC35D2Q76EJ3 337 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 SLC7A5P1Q8MH63 180 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 ZCCHC24Q8N2G6 241 aaKnown RBP1.24□□□□□ -2.21
CCDC38-204ENST00000546816 BAALCQ8WXS3 180 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 YIPF6Q96EC8 236 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 IGF2BP2-AS1Q96M15 143 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 GABRG3Q99928 467 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 ZNF649Q9BS31 505 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 STMN4Q9H169 189 aaPredicted RBP1.24□□□□□ -2.21
CCDC38-204ENST00000546816 VSIRQ9H7M9 311 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 SND1-IT1Q9HBX3 110 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 CRLF2Q9HC73 371 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 OR2S2Q9NQN1 319 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 TMEM100Q9NV29 134 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 RABL2AQ9UBK7 228 aaPredicted RBP1.24□□□□□ -2.21
CCDC38-204ENST00000546816 RAB23Q9ULC3 237 aa1.24□□□□□ -2.21
CCDC38-204ENST00000546816 PPIL1Q9Y3C6 166 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms