RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 BANF2Q9H503 90 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 MEMO1Q9Y316 297 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 SHISA8B8ZZ34 492 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 GAPDHP04406 335 aaKnown RBP16.48■□□□□ 0.23
MSLN-202ENST00000545450 ZNF708P17019 499 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 AMY2BP19961 511 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 OR3A4PP47883 348 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 POLR2GP62487 172 aaKnown RBP eCLIP16.48■□□□□ 0.23
MSLN-202ENST00000545450 HSF1Q00613 529 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 TCF15Q12870 199 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 FOXF1Q12946 379 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 TRIP6Q15654 476 aaKnown RBP16.48■□□□□ 0.23
MSLN-202ENST00000545450 PIP4P1Q86T03 277 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 KDF1Q8NAX2 398 aaPredicted RBP16.48■□□□□ 0.23
MSLN-202ENST00000545450 OR56B1Q8NGI3 324 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 ARHGAP5-AS1Q96IT6 56 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 NAA11Q9BSU3 229 aaPredicted RBP16.48■□□□□ 0.23
MSLN-202ENST00000545450 CNTNAP3Q9BZ76 1288 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 MED29Q9NX70 200 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 DMXL1Q9Y485 3027 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 IGLV3-32A0A0A0MS00 114 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 HOXB5P09067 269 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 OR8U9P0C7N5 309 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 ID4P47928 161 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 PPT1P50897 306 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 POU3F1Q03052 451 aaPredicted RBP16.47■□□□□ 0.23
MSLN-202ENST00000545450 EIF3IQ13347 325 aaKnown RBP16.47■□□□□ 0.23
MSLN-202ENST00000545450 PRAMEF20Q5VT98 475 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 OR2A2Q6IF42 318 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 OR10H5Q8NGA6 315 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 OR8U1Q8NH10 309 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 MFSD8Q8NHS3 518 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 ARL5BQ96KC2 179 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 TUBA4BQ9H853 241 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 JTBO76095 146 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 S100A6P06703 90 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 PMELP40967 661 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 OR3A2P47893 321 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 Q0VFX4 171 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 FAM189A2Q15884 450 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 Q6ZRG5 221 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 SECTM1Q8WVN6 248 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 SLC39A7Q92504 469 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 EMG1Q92979 244 aaKnown RBP16.47■□□□□ 0.23
MSLN-202ENST00000545450 STARD10Q9Y365 291 aa16.47■□□□□ 0.23
MSLN-202ENST00000545450 A0A1W2PP11 408 aa16.46■□□□□ 0.23
MSLN-202ENST00000545450 RPL12P30050 165 aaKnown RBP16.46■□□□□ 0.23
MSLN-202ENST00000545450 SSPNQ14714 243 aa16.46■□□□□ 0.23
MSLN-202ENST00000545450 MOB1AQ9H8S9 216 aa16.46■□□□□ 0.23
MSLN-202ENST00000545450 RPS10P5Q9NQ39 176 aa16.46■□□□□ 0.23
MSLN-202ENST00000545450 KLHL13Q9P2N7 655 aa16.46■□□□□ 0.23
MSLN-202ENST00000545450 METTL1Q9UBP6 276 aaKnown RBP16.46■□□□□ 0.23
MSLN-202ENST00000545450 B3GALT5Q9Y2C3 310 aa16.46■□□□□ 0.23
MSLN-202ENST00000545450 MED12Q93074 2177 aa16.46■□□□□ 0.23
MSLN-202ENST00000545450 ETV2O00321 342 aaPredicted RBP16.45■□□□□ 0.22
MSLN-202ENST00000545450 SDCBPO00560 298 aaPredicted RBP16.45■□□□□ 0.22
MSLN-202ENST00000545450 TP53I11O14683 189 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 HTR3BO95264 441 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 SFTPBP07988 381 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 CBR1P16152 277 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 MSX1P28360 303 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 AKR1C3P42330 323 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 TAS2R46P59540 309 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 FAM3AP98173 230 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 ARFRP1Q13795 201 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 SURF2Q15527 256 aaPredicted RBP16.45■□□□□ 0.22
MSLN-202ENST00000545450 PLPPR5Q32ZL2 321 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 TMEM164Q5U3C3 297 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 OPN5Q6U736 354 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 RPS19BP1Q86WX3 136 aaKnown RBP16.45■□□□□ 0.22
MSLN-202ENST00000545450 FAM89BQ8N5H3 189 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 LINC00469Q8N7U9 141 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 PRSS33Q8NF86 280 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 OR2M3Q8NG83 312 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 ST6GALNAC5Q9BVH7 336 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.45■□□□□ 0.22
MSLN-202ENST00000545450 SDHAF3Q9NRP4 125 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 K7EPK0 472 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 ZNF17P17021 662 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 APOBEC1P41238 236 aaKnown RBP16.45■□□□□ 0.22
MSLN-202ENST00000545450 SSR4P51571 173 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 MLF1P58340 268 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 AKIRIN2Q53H80 203 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 FAM71E2Q8N5Q1 922 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 WDSUB1Q8N9V3 476 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 TCEAL7Q9BRU2 100 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 SOX7Q9BT81 388 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 URM1Q9BTM9 101 aaKnown RBP16.45■□□□□ 0.22
MSLN-202ENST00000545450 CHST11Q9NPF2 352 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 FBXL17Q9UF56 701 aa16.45■□□□□ 0.22
MSLN-202ENST00000545450 A0A1W2PPE3 182 aa16.44■□□□□ 0.22
MSLN-202ENST00000545450 EFNA2O43921 213 aa16.44■□□□□ 0.22
MSLN-202ENST00000545450 EIF1BO60739 113 aaKnown RBP16.44■□□□□ 0.22
MSLN-202ENST00000545450 CRTAPO75718 401 aaPredicted RBP16.44■□□□□ 0.22
MSLN-202ENST00000545450 FCGR2CP31995 323 aa16.44■□□□□ 0.22
MSLN-202ENST00000545450 THBS4P35443 961 aa16.44■□□□□ 0.22
MSLN-202ENST00000545450 EIF1P41567 113 aaKnown RBP16.44■□□□□ 0.22
MSLN-202ENST00000545450 ZNF84P51523 738 aa16.44■□□□□ 0.22
MSLN-202ENST00000545450 ZNF41P51814 821 aaPredicted RBP16.44■□□□□ 0.22
MSLN-202ENST00000545450 SNU13P55769 128 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms