RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 BCL6BQ8N143 479 aaPredicted RBP9.44□□□□□ -0.9
YBX3-216ENST00000544622 ZDHHC22Q8N966 263 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 POC1AQ8NBT0 407 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 OR52I1Q8NGK6 324 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 C8orf46Q8TAG6 207 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 C22orf15Q8WYQ4 148 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 SDSLQ96GA7 329 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 C4orf36Q96KX1 117 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 ZNF48Q96MX3 618 aaPredicted RBP9.44□□□□□ -0.9
YBX3-216ENST00000544622 GAFA1Q96PS6 74 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 SLC6A7Q99884 636 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 NRIP2Q9BQI9 281 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 ALG8Q9BVK2 526 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 C19orf24Q9BVV8 132 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 CHST5Q9GZS9 411 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 SIRPDQ9H106 197 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 PRDM13Q9H4Q3 707 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 FGF20Q9NP95 211 aaPredicted RBP9.44□□□□□ -0.9
YBX3-216ENST00000544622 ESM1Q9NQ30 184 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 SNTG1Q9NSN8 517 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 RPUSD1Q9UJJ7 312 aaKnown RBP9.44□□□□□ -0.9
YBX3-216ENST00000544622 MAB21L2Q9Y586 359 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 IGKV1-9A0A0C4DH69 117 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 LOC107986453A0A1B0GWG9 222 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 E9PI62 339 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 J3QLW9 94 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 TFF1P04155 84 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 SELLP14151 372 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 ZNF19P17023 458 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 CAV3P56539 151 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 BPIFB3P59826 476 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 ACTA2P62736 377 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 ACTG2P63267 376 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 IL24Q13007 206 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 ALKBH1Q13686 389 aaKnown RBP9.43□□□□□ -0.9
YBX3-216ENST00000544622 KLHL22Q53GT1 634 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 LAIR2Q6ISS4 152 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 ACP7Q6ZNF0 438 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 ANGPTL5Q86XS5 388 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 PNLDC1Q8NA58 520 aaKnown RBP9.43□□□□□ -0.9
YBX3-216ENST00000544622 ZNF555Q8NEP9 628 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 PP6455Q8WZ26 134 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 TMIGD2Q96BF3 282 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 ADAT3Q96EY9 351 aaPredicted RBP9.43□□□□□ -0.9
YBX3-216ENST00000544622 MED30Q96HR3 178 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 C1orf147Q96MC9 270 aaPredicted RBP9.43□□□□□ -0.9
YBX3-216ENST00000544622 WDFY2Q96P53 400 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 TBX15Q96SF7 602 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 DCTN5Q9BTE1 182 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 SUCNR1Q9BXA5 334 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 PKIBQ9C010 78 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 CNTD2Q9H8S5 307 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 DNAJB11Q9UBS4 358 aa9.43□□□□□ -0.9
YBX3-216ENST00000544622 CENPVL3A0A0U1RRI6 287 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 H3BSH0 61 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 NDUFB3O43676 98 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 SFTPBP07988 381 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 HTR1AP08908 422 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 FUT6P51993 359 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 GMFBP60983 142 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 IL13RA1P78552 427 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 MRPL28Q13084 256 aaKnown RBP9.42□□□□□ -0.9
YBX3-216ENST00000544622 IKZF1Q13422 519 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 IL18R1Q13478 541 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 LRRC10Q5BKY1 277 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 CRIP3Q6Q6R5 217 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 UTS2BQ765I0 119 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 BPIFB2Q8N4F0 458 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 ZNRF1Q8ND25 227 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 DNAAF1Q8NEP3 725 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 OR51A4Q8NGJ6 313 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 OR10AC1Q8NH08 325 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 CNIH3Q8TBE1 160 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 FAM216AQ8WUB2 273 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 FBLIM1Q8WUP2 373 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 ST8SIA4Q92187 359 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 ZNF488Q96MN9 340 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 JMJD8Q96S16 334 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 MYCBPQ99417 103 aaPredicted RBP9.42□□□□□ -0.9
YBX3-216ENST00000544622 ADI1Q9BV57 179 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 DCLRE1BQ9H816 532 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 MTCH1Q9NZJ7 389 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 POLDIP2Q9Y2S7 368 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 SOX21Q9Y651 276 aaPredicted RBP9.42□□□□□ -0.9
YBX3-216ENST00000544622 HSPE1-MOB4S4R3N1 261 aa9.42□□□□□ -0.9
YBX3-216ENST00000544622 TRAV40A0A0B4J280 105 aa9.41□□□□□ -0.9
YBX3-216ENST00000544622 RFPL4AA6NLU0 287 aa9.41□□□□□ -0.9
YBX3-216ENST00000544622 RFPL4AL1F8VTS6 287 aa9.41□□□□□ -0.9
YBX3-216ENST00000544622 F8VVB4 439 aa9.41□□□□□ -0.9
YBX3-216ENST00000544622 F8VWA3 439 aa9.41□□□□□ -0.9
YBX3-216ENST00000544622 H0YAE9 185 aa9.41□□□□□ -0.9
YBX3-216ENST00000544622 GATBO75879 557 aaKnown RBP9.41□□□□□ -0.9
YBX3-216ENST00000544622 RGS9O75916 674 aaPredicted RBP9.41□□□□□ -0.9
YBX3-216ENST00000544622 TOX4O94842 621 aa9.41□□□□□ -0.9
YBX3-216ENST00000544622 ALX3O95076 343 aa9.41□□□□□ -0.9
YBX3-216ENST00000544622 ZFPL1O95159 310 aa9.41□□□□□ -0.9
YBX3-216ENST00000544622 SERPINA3P01011 423 aa9.41□□□□□ -0.9
YBX3-216ENST00000544622 MT-ND2P03891 347 aa9.41□□□□□ -0.9
YBX3-216ENST00000544622 GNAO1P09471 354 aa9.41□□□□□ -0.9
YBX3-216ENST00000544622 DCKP27707 260 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms