RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 C8orf59Q8N0T1 100 aaPredicted RBP13.48□□□□□ -0.25
CIT-212ENST00000543239 FAM216BQ8N7L0 139 aa13.48□□□□□ -0.25
CIT-212ENST00000543239 OR5T2Q8NGG2 359 aa13.48□□□□□ -0.25
CIT-212ENST00000543239 ST8SIA4Q92187 359 aa13.48□□□□□ -0.25
CIT-212ENST00000543239 MED30Q96HR3 178 aa13.48□□□□□ -0.25
CIT-212ENST00000543239 DMRTB1Q96MA1 342 aa13.48□□□□□ -0.25
CIT-212ENST00000543239 PKIBQ9C010 78 aa13.48□□□□□ -0.25
CIT-212ENST00000543239 RASSF4Q9H2L5 321 aa13.48□□□□□ -0.25
CIT-212ENST00000543239 ISG20L2Q9H9L3 353 aaKnown RBP13.48□□□□□ -0.25
CIT-212ENST00000543239 SNTG1Q9NSN8 517 aa13.48□□□□□ -0.25
CIT-212ENST00000543239 NUP50Q9UKX7 468 aa13.48□□□□□ -0.25
CIT-212ENST00000543239 DIMT1Q9UNQ2 313 aaKnown RBP13.48□□□□□ -0.25
CIT-212ENST00000543239 A0A1B0GW55 424 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 TMEM212A6NML5 194 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 SYNGR1O43759 233 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 CCDC159P0C7I6 412 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 DUX4L2P0CJ85 424 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 DUX4L3P0CJ86 424 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 DUX4L4P0CJ87 422 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 DUX4L5P0CJ88 424 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 DUX4L6P0CJ89 424 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 DUX4L7P0CJ90 424 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 ZNF20P17024 532 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 FPR2P25090 351 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 GBX2P52951 348 aaPredicted RBP13.47□□□□□ -0.25
CIT-212ENST00000543239 IL13RA1P78552 427 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 IL24Q13007 206 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 LRRC10Q5BKY1 277 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 KLF17Q5JT82 389 aaPredicted RBP13.47□□□□□ -0.25
CIT-212ENST00000543239 DUX4L9Q6RFH8 374 aaPredicted RBP13.47□□□□□ -0.25
CIT-212ENST00000543239 UTS2BQ765I0 119 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 BTN2A1Q7KYR7 527 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 BPIFB2Q8N4F0 458 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 ZNF676Q8N7Q3 588 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 DNAAF1Q8NEP3 725 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 TRMT10AQ8TBZ6 339 aaKnown RBP13.47□□□□□ -0.25
CIT-212ENST00000543239 ADAT3Q96EY9 351 aaPredicted RBP13.47□□□□□ -0.25
CIT-212ENST00000543239 GAFA1Q96PS6 74 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 NRIP2Q9BQI9 281 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 SUCNR1Q9BXA5 334 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 DUX4Q9UBX2 424 aa13.47□□□□□ -0.25
CIT-212ENST00000543239 RPUSD1Q9UJJ7 312 aaKnown RBP13.47□□□□□ -0.25
CIT-212ENST00000543239 CAB39Q9Y376 341 aaPredicted RBP13.47□□□□□ -0.25
CIT-212ENST00000543239 IGKV1D-17A0A075B6S4 117 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 FAM230AA0A1W2PPH8 454 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 ERICH4A6NGS2 130 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 ZNF879B4DU55 563 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 SIGLEC5O15389 551 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 PSG2P11465 335 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 HILS1P60008 231 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 FGF12P61328 243 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 KRTAP24-1Q3LI83 254 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 TMPRSS11AQ6ZMR5 421 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 ACP7Q6ZNF0 438 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 CALHM1Q8IU99 346 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 OR13C3Q8NGS6 347 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 NPRL2Q8WTW4 380 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 BORCS8Q96FH0 119 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 JMJD8Q96S16 334 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 COMMD4Q9H0A8 199 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 HES4Q9HCC6 221 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 NKX1-2Q9UD57 310 aaPredicted RBP13.46□□□□□ -0.25
CIT-212ENST00000543239 ZNF222Q9UK12 451 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 EXOSC1Q9Y3B2 195 aaKnown RBP13.46□□□□□ -0.25
CIT-212ENST00000543239 COL6A5A8TX70 2615 aa13.46□□□□□ -0.25
CIT-212ENST00000543239 E9PI62 339 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 H0YJX3 145 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 ZFPL1O95159 310 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 PLATP00750 562 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 GNAO1P09471 354 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 PIPP12273 146 aaPredicted RBP13.45□□□□□ -0.26
CIT-212ENST00000543239 MYL12AP19105 171 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 PRKACBP22694 351 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 RBP2P50120 134 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 ETV1P50549 477 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 CAV3P56539 151 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 ERVK11-1P61568 191 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 IKZF1Q13422 519 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 MED21Q13503 144 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 TUSC1Q2TAM9 212 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 CCDC58Q4VC31 144 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 ANGPTL5Q86XS5 388 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 LY6G5BQ8NDX9 201 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 OR51A4Q8NGJ6 313 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 OR10AC1Q8NH08 325 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 OR5AK2Q8NH90 309 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 FBLIM1Q8WUP2 373 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 TFAP2CQ92754 450 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 SPSB1Q96BD6 273 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 FGGYQ96C11 551 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 SDSLQ96GA7 329 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 ZNF488Q96MN9 340 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 SLC6A7Q99884 636 aa13.45□□□□□ -0.26
CIT-212ENST00000543239 SLC25A10Q9UBX3 287 aaPredicted RBP13.45□□□□□ -0.26
CIT-212ENST00000543239 IGKV1-27A0A075B6S5 117 aa13.44□□□□□ -0.26
CIT-212ENST00000543239 TRAV40A0A0B4J280 105 aa13.44□□□□□ -0.26
CIT-212ENST00000543239 TRBV2A0A0J9YWF9 115 aa13.44□□□□□ -0.26
CIT-212ENST00000543239 EFCAB10A6NFE3 127 aa13.44□□□□□ -0.26
CIT-212ENST00000543239 NXPH2O95156 264 aa13.44□□□□□ -0.26
CIT-212ENST00000543239 MMP9P14780 707 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms