RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	SP6	Q3SY56	376 aa		11.32	□□□□□ -0.6
DDX11-223	ENST00000542838	SLC16A14	Q7RTX9	510 aa		11.32	□□□□□ -0.6
DDX11-223	ENST00000542838	COMMD1	Q8N668	190 aa		11.32	□□□□□ -0.6
DDX11-223	ENST00000542838	SLC38A9	Q8NBW4	561 aa		11.32	□□□□□ -0.6
DDX11-223	ENST00000542838	TSTD1	Q8NFU3	115 aa		11.32	□□□□□ -0.6
DDX11-223	ENST00000542838	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.32	□□□□□ -0.6
DDX11-223	ENST00000542838	HAS2	Q92819	552 aa		11.32	□□□□□ -0.6
DDX11-223	ENST00000542838	TCEAL3	Q969E4	200 aa		11.32	□□□□□ -0.6
DDX11-223	ENST00000542838	ZNF251	Q9BRH9	671 aa		11.32	□□□□□ -0.6
DDX11-223	ENST00000542838	NIT2	Q9NQR4	276 aa		11.32	□□□□□ -0.6
DDX11-223	ENST00000542838	LUZP4	Q9P127	313 aa		11.32	□□□□□ -0.6
DDX11-223	ENST00000542838	KCNIP3	Q9Y2W7	256 aa		11.32	□□□□□ -0.6
DDX11-223	ENST00000542838	NSG2	Q9Y328	171 aa		11.32	□□□□□ -0.6
DDX11-223	ENST00000542838	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	CA11	O75493	328 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	SEC11B	P0C7V7	166 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	OR5H8	P0DN80	308 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	GUCA1A	P43080	201 aa	Predicted RBP	11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	GLP1R	P43220	463 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	FHIT	P49789	147 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	CLDN17	P56750	224 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	PIGP	P57054	158 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	HIST3H3	Q16695	136 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	TMEM176B	Q3YBM2	270 aa	Predicted RBP	11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	DTX1	Q86Y01	620 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	OR10G3	Q8NGC4	313 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	WFDC1	Q9HC57	220 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	ZMAT5	Q9UDW3	170 aa	Known RBP	11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	ANXA10	Q9UJ72	324 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	OR5H15	A6NDH6	313 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	TLX3	O43711	291 aa	Predicted RBP	11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	IGLV3-1	P01715	115 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	ACKR3	P25106	362 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	PTGDS	P41222	190 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	CARF	Q8N187	725 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	PP6455	Q8WZ26	134 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	PIGQ	Q9BRB3	760 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	ARV1	Q9H2C2	271 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	TUBA4B	Q9H853	241 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838		V9GYS6	101 aa		11.31	□□□□□ -0.6
DDX11-223	ENST00000542838	hCG_1809904	A0A1W2PP81	198 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838		A0A1W2PR64	198 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838		A0A1W2PRV1	198 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	XRCC2	O43543	280 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	DIRAS3	O95661	229 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	PRH1	P02810	166 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	RRAD	P55042	308 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	RPUSD3	Q6P087	351 aa	Known RBP	11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	KDF1	Q8NAX2	398 aa	Predicted RBP	11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	SCRT1	Q9BWW7	348 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	CHST5	Q9GZS9	411 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	LIME1	Q9H400	295 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	GSN-AS1	Q9NRJ2	163 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	C19orf12	Q9NSK7	152 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	ZNF850	A8MQ14	1090 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	UMAD1	C9J7I0	102 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	MASP2	O00187	686 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	ZNF205	O95201	554 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	OR5AC1	P0C628	307 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	CTSS	P25774	331 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	ZNF133	P52736	654 aa	Predicted RBP	11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	CHAF1B	Q13112	559 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	ABCA11P	Q4W5N1	156 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	LRRC18	Q8N456	261 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	RNF138	Q8WVD3	245 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	FAAP24	Q9BTP7	215 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	TGIF2	Q9GZN2	237 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838	SPAG17	Q6Q759	2223 aa		11.3	□□□□□ -0.6
DDX11-223	ENST00000542838		A0A0U1RQV5	110 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	GPR137B	O60478	399 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	C1QL1	O75973	258 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	ARG1	P05089	322 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	RAB5A	P20339	215 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	MSR1	P21757	451 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	OPRM1	P35372	400 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	TMEM187	Q14656	261 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	FAM24B	Q8N5W8	94 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	GJC3	Q8NFK1	279 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	OR2M3	Q8NG83	312 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	OR5L2	Q8NGL0	311 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	CD300LF	Q8TDQ1	290 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	SLC39A7	Q92504	469 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838		Q96M66	194 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	TAAR9	Q96RI9	348 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	GINS3	Q9BRX5	216 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	RSRP1	Q9BUV0	290 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	NAA60	Q9H7X0	242 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	SEBOX	Q9HB31	216 aa	Predicted RBP	11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	METTL1	Q9UBP6	276 aa	Known RBP	11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	MSTN	O14793	375 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	ZNF728	P0DKX0	622 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	P2RY1	P47900	373 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	FXYD4	P59646	89 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	LSM6	P62312	80 aa	Known RBP	11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	ADAM5	Q6NVV9	412 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	SYT13	Q7L8C5	426 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	LYZL2	Q7Z4W2	148 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	TMEM156	Q8N614	296 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms