RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 EDEM2Q9BV94 578 aa11.84□□□□□ -0.51
PTPN1-202ENST00000541713 GPR132Q9UNW8 380 aa11.84□□□□□ -0.51
PTPN1-202ENST00000541713 A0A1B0GW55 424 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 LOC390937A0A1W2PQ73 354 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 OR6C65A6NJZ3 312 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 CHRM2P08172 466 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 CELA3AP09093 270 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 DUX4L2P0CJ85 424 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 DUX4L3P0CJ86 424 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 DUX4L4P0CJ87 422 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 DUX4L5P0CJ88 424 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 DUX4L6P0CJ89 424 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 DUX4L7P0CJ90 424 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 SUCLG1P53597 346 aaKnown RBP11.83□□□□□ -0.52
PTPN1-202ENST00000541713 PIGPP57054 158 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 SLC16A14Q7RTX9 510 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 LYZL2Q7Z4W2 148 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 PIK3IP1Q96FE7 263 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 LIME1Q9H400 295 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 IL36RNQ9UBH0 155 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 DUX4Q9UBX2 424 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 HLA-HP01893 362 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 P04436 131 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 NPBWR1P48145 328 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 ZNF84P51523 738 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 AADACL3Q5VUY0 350 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 TMEM105Q8N8V8 129 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 SULT4A1Q9BR01 284 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 NELFAQ9H3P2 528 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 AK3Q9UIJ7 227 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 SFT2D2O95562 160 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 CD79AP11912 226 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 FCGR2CP31995 323 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 IKZF1Q13422 519 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 SPATA46Q5T0L3 261 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 LYPD6Q86Y78 171 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 MAML2Q8IZL2 1156 aaPredicted RBP11.83□□□□□ -0.52
PTPN1-202ENST00000541713 MARS2Q96GW9 593 aaKnown RBP11.83□□□□□ -0.52
PTPN1-202ENST00000541713 ZNF488Q96MN9 340 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 SLC25A32Q9H2D1 315 aa11.83□□□□□ -0.52
PTPN1-202ENST00000541713 TRIM77I1YAP6 450 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 NPBWR2P48146 333 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 SLC25A26Q70HW3 274 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 AGBL5Q8NDL9 886 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 TGIF2Q9GZN2 237 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 SPTA1P02549 2419 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 C10orf142B7Z368 130 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 DHRS3O75911 302 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 CD8AP01732 235 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 OR5AC1P0C628 307 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 PRKACAP17612 351 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 IL32P24001 234 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 OPN5Q6U736 354 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 FNDC9Q8TBE3 224 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 SECTM1Q8WVN6 248 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 PRRG4Q9BZD6 226 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 TAF9BQ9HBM6 251 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 ST3GAL6Q9Y274 331 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 AMDHD2Q9Y303 409 aa11.82□□□□□ -0.52
PTPN1-202ENST00000541713 IGKV1-27A0A075B6S5 117 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 A0A1B0GTQ1 180 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 DNASE2O00115 360 aaPredicted RBP11.81□□□□□ -0.52
PTPN1-202ENST00000541713 MFNGO00587 321 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 ADCYAP1P18509 176 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 PVALBP20472 110 aaPredicted RBP11.81□□□□□ -0.52
PTPN1-202ENST00000541713 MSX1P28360 303 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 RIPPLY1Q0D2K3 151 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 KMT5CQ86Y97 462 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 TMEM217Q8N7C4 229 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 ZDHHC22Q8N966 263 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 SPTSSAQ969W0 71 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 SLAMF9Q96A28 289 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 C12orf49Q9H741 205 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 PCDHB16Q9NRJ7 776 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 PADI1Q9ULC6 663 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 K7EPK0 472 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 PHF1O43189 567 aaPredicted RBP11.81□□□□□ -0.52
PTPN1-202ENST00000541713 ONECUT2O95948 504 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 FOLR3P41439 243 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 CAV2P51636 162 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 ZNF92Q03936 586 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 ECH1Q13011 328 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 IZUMO4Q1ZYL8 232 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 HSD17B13Q7Z5P4 300 aaPredicted RBP11.81□□□□□ -0.52
PTPN1-202ENST00000541713 SGPP2Q8IWX5 399 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 FAM71E2Q8N5Q1 922 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 DTWD2Q8NBA8 298 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 ISOC2Q96AB3 205 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 HS3ST6Q96QI5 342 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 DUSP23Q9BVJ7 150 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 ZNF587BE7ETH6 402 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 LIFP15018 202 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 EPHA1P21709 976 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 CPT2P23786 658 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 LPAR6P43657 344 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 HOXA4Q00056 320 aaPredicted RBP11.81□□□□□ -0.52
PTPN1-202ENST00000541713 SSBP1Q04837 148 aaKnown RBP11.81□□□□□ -0.52
PTPN1-202ENST00000541713 SWI5Q1ZZU3 235 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 IGSF11Q5DX21 431 aa11.81□□□□□ -0.52
PTPN1-202ENST00000541713 OVCH2Q7RTZ1 564 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms