RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-219	ENST00000541513	GVINP1	Q7Z2Y8	2422 aa		4.57	□□□□□ -1.68
DDB1-219	ENST00000541513	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	TRAV8-7	A0A075B6U6	113 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	EFCAB7	A8K855	629 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	LYRM9	A8MSI8	78 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	C10orf142	B7Z368	130 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513		C9J4A7	227 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	C11orf98	E9PRG8	122 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	KCNK1	O00180	336 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	TYROBP	O43914	113 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	CDC40	O60508	579 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	IFNA21	P01568	189 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	IFNG	P01579	166 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	IGHV4-39	P01824	125 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	IFNA4	P05014	189 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	RPLP0	P05388	317 aa	Known RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	HLA-DQB2	P05538	268 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	ACSM4	P0C7M7	580 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	FRMD6-AS1	P0C7T7	363 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	SCGB1A1	P11684	91 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	LIF	P15018	202 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	SERPINA2	P20848	420 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	DRD3	P35462	400 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	PSMD8	P48556	350 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	EIF2B2	P49770	351 aa	Known RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	ATP4B	P51164	291 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	IDH3G	P51553	393 aa	Predicted RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	CAV2	P51636	162 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	CRYBA2	P53672	197 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	HMGCS1	Q01581	520 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	DHODH	Q02127	395 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	TLE4	Q04727	773 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	MLLT11	Q13015	90 aa	Predicted RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	ZNF154	Q13106	437 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	KIAA0141	Q14154	515 aa	Predicted RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	CST6	Q15828	149 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	OGFRL1	Q5TC84	451 aa	Predicted RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	TRIQK	Q629K1	86 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	CYB5R2	Q6BCY4	276 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	ACOT7L	Q6ZUV0	252 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	TMED4	Q7Z7H5	227 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	KLHDC8B	Q8IXV7	354 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	VKORC1L1	Q8N0U8	176 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	ZNF567	Q8N184	647 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	ZNF114	Q8NC26	417 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	DUSP18	Q8NEJ0	188 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	ATP6V1C2	Q8NEY4	427 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	OR51D1	Q8NGF3	324 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	OR11L1	Q8NGX0	322 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	GATAD1	Q8WUU5	269 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	OR5P2	Q8WZ92	322 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	C2orf48	Q96LS8	159 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	MS4A4E	Q96PG1	132 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	PFDN5	Q99471	154 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	NKX3-1	Q99801	234 aa	Predicted RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	APOL4	Q9BPW4	351 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	TCEAL7	Q9BRU2	100 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	TMEM109	Q9BVC6	243 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	KRTAP9-3	Q9BYQ3	159 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	DDX31	Q9H8H2	851 aa	Known RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	MEPE	Q9NQ76	525 aa	Predicted RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	FGFR1OP2	Q9NVK5	253 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	B3GNT2	Q9NY97	397 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	TREM2	Q9NZC2	230 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	OR52A1	Q9UKL2	312 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	KCNS2	Q9ULS6	477 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	NTNG1	Q9Y2I2	539 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	GOLT1B	Q9Y3E0	138 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	L3MBTL1	Q9Y468	752 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	ASB4	Q9Y574	426 aa		4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	CNOT1	A5YKK6	2376 aa	Known RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	ASCC3	Q8N3C0	2202 aa	Known RBP	4.56	□□□□□ -1.68
DDB1-219	ENST00000541513	PLXNB3	Q9ULL4	1909 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	IGLV5-52	A0A0A0MRZ9	124 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	IGHV1OR15-9	A0A0B4J2B8	117 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	TMEM272	A0A1B0GTI8	110 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513		A0A1W2PR80	420 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513		A0A1W2PRG6	482 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	RNF212B	A8MTL3	300 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513		J3QLI3	93 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	PSMD12	O00232	456 aa	Predicted RBP	4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	TNFSF12	O43508	249 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	GLS	O94925	669 aa	Predicted RBP	4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	CLIC3	O95833	236 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	PAK4	O96013	591 aa	Predicted RBP	4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	IFNA10	P01566	189 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	S100A8	P05109	93 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	ELK4	P28324	431 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	ERP29	P30040	261 aa	Known RBP	4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	TIMP3	P35625	211 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	SOX3	P41225	446 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	SELENOP	P49908	381 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	STC1	P52823	247 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	OR10A3	P58181	314 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	LINC00310	P59036	64 aa		4.55	□□□□□ -1.68
DDB1-219	ENST00000541513	MAX	P61244	160 aa		4.55	□□□□□ -1.68

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