RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 FAM24BQ8N5W8 94 aa13.82□□□□□ -0.2
HMGA2-210ENST00000541363 OR10G4Q8NGN3 311 aa13.82□□□□□ -0.2
HMGA2-210ENST00000541363 OR10G9Q8NGN4 311 aa13.82□□□□□ -0.2
HMGA2-210ENST00000541363 OR10G7Q8NGN6 311 aa13.82□□□□□ -0.2
HMGA2-210ENST00000541363 STARD4Q96DR4 205 aa13.82□□□□□ -0.2
HMGA2-210ENST00000541363 LANCL1O43813 399 aa13.82□□□□□ -0.2
HMGA2-210ENST00000541363 ICOSLGO75144 302 aa13.82□□□□□ -0.2
HMGA2-210ENST00000541363 LBX1P52954 281 aa13.82□□□□□ -0.2
HMGA2-210ENST00000541363 PLP1P60201 277 aa13.82□□□□□ -0.2
HMGA2-210ENST00000541363 ZNF25P17030 456 aaPredicted RBP13.81□□□□□ -0.2
HMGA2-210ENST00000541363 FAM71E1Q6IPT2 247 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 FAM26EQ8N5C1 309 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 SCMH1Q96GD3 660 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 LOC107984156A0A0G2JMH3 177 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 ZBTB37Q5TC79 503 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 ARL17AQ8IVW1 177 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 MRPL43Q8N983 215 aaKnown RBP13.81□□□□□ -0.2
HMGA2-210ENST00000541363 DUSP18Q8NEJ0 188 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 OR2T10Q8NGZ9 312 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 SDF2Q99470 211 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 APCSP02743 223 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 F11P03951 625 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 YBX1P67809 324 aaKnown RBP13.81□□□□□ -0.2
HMGA2-210ENST00000541363 C15orf39Q6ZRI6 1047 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 CRISPLD2Q9H0B8 497 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 DUSP21Q9H596 190 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 SNED1Q8TER0 1413 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 CRYABP02511 175 aaKnown RBP13.81□□□□□ -0.2
HMGA2-210ENST00000541363 CD22P20273 847 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 WNT3P56703 355 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 PNRC1Q12796 327 aaPredicted RBP13.81□□□□□ -0.2
HMGA2-210ENST00000541363 PELI3Q8N2H9 469 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 GABARAPL3Q9BY60 117 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 PITPNC1Q9UKF7 332 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 M0R296 226 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 AKR7A2O43488 359 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 ZNF253O75346 499 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 ID1P41134 155 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 RNF167Q9H6Y7 350 aa13.81□□□□□ -0.2
HMGA2-210ENST00000541363 J3KRW8 73 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 OR4A8P0C604 315 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 NMUP48645 174 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 LIMK1P53667 647 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 SYS1Q8N2H4 156 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 DERL3Q96Q80 235 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 CNTD2Q9H8S5 307 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 HDGFL3Q9Y3E1 203 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 TRAV1-2A0A0B4J238 106 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 A0A1W2PPC4 97 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 TARM1B6A8C7 271 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 FUT3P21217 361 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 COL8A1P27658 744 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 DCTDP32321 178 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 GNG3P63215 75 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 UBE2L3P68036 154 aaKnown RBP13.8□□□□□ -0.2
HMGA2-210ENST00000541363 AQP6Q13520 282 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 TMEM215Q68D42 235 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 NOXO1Q8NFA2 376 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 GABRG3Q99928 467 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 OR2D2Q9H210 308 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 CYB5R1Q9UHQ9 305 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 SOX21Q9Y651 276 aaPredicted RBP13.8□□□□□ -0.2
HMGA2-210ENST00000541363 FABP2P12104 132 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 PRSS8Q16651 343 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 RRN3P1Q2M238 152 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 NUFIP2Q7Z417 695 aaKnown RBP13.8□□□□□ -0.2
HMGA2-210ENST00000541363 PP6455Q8WZ26 134 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 ANGPTL4Q9BY76 406 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 CHRNA10Q9GZZ6 450 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 RASL12Q9NYN1 266 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 B4GALT1P15291 398 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 FBXL6Q8N531 539 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 ARRDC1Q8N5I2 433 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 TECRQ9NZ01 308 aaKnown RBP13.8□□□□□ -0.2
HMGA2-210ENST00000541363 SMPD2O60906 423 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 LPAR6P43657 344 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 PFN3P60673 137 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 OR10G8Q8NGN5 311 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 PIK3IP1Q96FE7 263 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 A4GNTQ9UNA3 340 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 COL1A1P02452 1464 aaPredicted RBP13.8□□□□□ -0.2
HMGA2-210ENST00000541363 H0YIG0 161 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 TSPAN12O95859 305 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 KCNAB1Q14722 419 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 SPACA9Q96E40 222 aaPredicted RBP13.8□□□□□ -0.2
HMGA2-210ENST00000541363 CDCA4Q9BXL8 241 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 TCF21O43680 179 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 ACAA1P09110 424 aaPredicted RBP13.8□□□□□ -0.2
HMGA2-210ENST00000541363 MEOX2P50222 304 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 FGF8P55075 233 aaPredicted RBP13.8□□□□□ -0.2
HMGA2-210ENST00000541363 PLAURQ03405 335 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 PRRX2Q99811 253 aa13.8□□□□□ -0.2
HMGA2-210ENST00000541363 TAPBPO15533 448 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 CDC20Q12834 499 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 TMEM207Q6UWW9 146 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 ZNF502Q8TBZ5 544 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 UBE2FQ969M7 185 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 EID2BQ96D98 161 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 AUNIPQ9H7T9 357 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 GLCCI1Q86VQ1 547 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms