RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 OR2M7Q8NG81 312 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 KCNE4Q8WWG9 221 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 ARL11Q969Q4 196 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 RAB3CQ96E17 227 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 MRPS28Q9Y2Q9 187 aaKnown RBP14.99□□□□□ -0.01
SPIDR-227ENST00000541342 SFT2D2O95562 160 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 RPS2P15880 293 aaKnown RBP14.99□□□□□ -0.01
SPIDR-227ENST00000541342 SLC6A9P48067 706 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 STK11Q15831 433 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 CRIP3Q6Q6R5 217 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 KLHL24Q6TFL4 600 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 NAA40Q86UY6 237 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 TMEM123Q8N131 208 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 ADGRG7Q96K78 797 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 ESRP2Q9H6T0 727 aaKnown RBP14.99□□□□□ -0.01
SPIDR-227ENST00000541342 MRPS18CQ9Y3D5 142 aaKnown RBP14.99□□□□□ -0.01
SPIDR-227ENST00000541342 FLVCR1Q9Y5Y0 555 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 CDRT15L2A8MXV6 281 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 NPIPA2E9PIF3 369 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 NPIPA3F8WFD2 350 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 VAMP5O95183 116 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 GFRA1P56159 465 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 RAC3P60763 192 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 OR1C1Q15619 314 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 OR8B12Q8NGG6 310 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 TMEM54Q969K7 222 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 ARHGAP5-AS1Q96IT6 56 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 MMP26Q9NRE1 261 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 FAM96BQ9Y3D0 163 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 LHFPL1Q86WI0 220 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 OR13G1Q8NGZ3 307 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 SSC4DQ8WTU2 575 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 RAB18Q9NP72 206 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 UQCC1Q9NVA1 299 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 LPAR3Q9UBY5 353 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 PTPRBP23467 1997 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 E9PLN8 166 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 MFNGO00587 321 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 CHRM2P08172 466 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 GSTP1P09211 210 aaKnown RBP14.98□□□□□ -0.01
SPIDR-227ENST00000541342 IL15RAQ13261 267 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 PRSS54Q6PEW0 395 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 DRAM2Q6UX65 266 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 SULF2Q8IWU5 870 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 ARRDC1Q8N5I2 433 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 FAM173AQ9BQD7 235 aa14.98□□□□□ -0.01
SPIDR-227ENST00000541342 CARD18P57730 90 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 CYCSP99999 105 aaKnown RBP14.97□□□□□ -0.01
SPIDR-227ENST00000541342 ABHD12BQ7Z5M8 362 aaPredicted RBP14.97□□□□□ -0.01
SPIDR-227ENST00000541342 IP6K3Q96PC2 410 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 AQP10Q96PS8 301 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 OCSTAMPQ9BR26 566 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 SLC5A7Q9GZV3 580 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 ZNF703Q9H7S9 590 aaPredicted RBP14.97□□□□□ -0.01
SPIDR-227ENST00000541342 PNRC2Q9NPJ4 139 aaKnown RBP14.97□□□□□ -0.01
SPIDR-227ENST00000541342 ASH2LQ9UBL3 628 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 BOKQ9UMX3 212 aaPredicted RBP14.97□□□□□ -0.01
SPIDR-227ENST00000541342 SPENQ96T58 3664 aaKnown RBP14.97□□□□□ -0.01
SPIDR-227ENST00000541342 IGKV1-9A0A0C4DH69 117 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 C5orf63A6NC05 138 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 ZNF98A6NK75 572 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 CELA3AP09093 270 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 ZNF20P17024 532 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 NTF4P34130 210 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 CSNK1A1P48729 337 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 KCNMB1Q16558 191 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 GPR84Q9NQS5 396 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 MLXQ9UH92 298 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 ZNF705EA8MWA4 302 aaPredicted RBP14.97□□□□□ -0.01
SPIDR-227ENST00000541342 TLX3O43711 291 aaPredicted RBP14.97□□□□□ -0.01
SPIDR-227ENST00000541342 CXCL13O43927 109 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 PVALBP20472 110 aaPredicted RBP14.97□□□□□ -0.01
SPIDR-227ENST00000541342 ZNF585AQ6P3V2 769 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 CNTNAP3BQ96NU0 1288 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 TMEM59Q9BXS4 323 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 SEC11CQ9BY50 192 aa14.97□□□□□ -0.01
SPIDR-227ENST00000541342 FOXD3Q9UJU5 478 aaPredicted RBP14.97□□□□□ -0.01
SPIDR-227ENST00000541342 DNPH1O43598 174 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 MUC1P15941 1255 aaPredicted RBP14.96□□□□□ -0.01
SPIDR-227ENST00000541342 NFYBP25208 207 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 ZNF121P58317 390 aaPredicted RBP14.96□□□□□ -0.01
SPIDR-227ENST00000541342 PJVKQ0ZLH3 352 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 RAB32Q13637 225 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 OR10D3Q8NH80 312 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 FER1L6-AS2Q96M78 137 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 ASCL3Q9NQ33 180 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 POLR1DQ9Y2S0 133 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 RER1O15258 196 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 FPR2P25090 351 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 RPL35P42766 123 aaKnown RBP14.96□□□□□ -0.01
SPIDR-227ENST00000541342 HOXA1P49639 335 aaPredicted RBP14.96□□□□□ -0.01
SPIDR-227ENST00000541342 ZNF133P52736 654 aaPredicted RBP14.96□□□□□ -0.01
SPIDR-227ENST00000541342 SRSF6Q13247 344 aaKnown RBP14.96□□□□□ -0.01
SPIDR-227ENST00000541342 GFOD2Q3B7J2 385 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 C10orf128Q5T292 105 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 POC1AQ8NBT0 407 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 ABI3Q9P2A4 366 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 OSGIN2Q9Y236 505 aa14.96□□□□□ -0.01
SPIDR-227ENST00000541342 ZNF878C9JN71 531 aa14.95□□□□□ -0.02
SPIDR-227ENST00000541342 SDCBPO00560 298 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms