RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 STT3BQ8TCJ2 826 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 ABHD14BQ96IU4 210 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 SELENOIQ9C0D9 397 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 SLC35B3Q9H1N7 401 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 UFSP2Q9NUQ7 469 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 TREM2Q9NZC2 230 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 CACFD1Q9UGQ2 172 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 ERRFI1Q9UJM3 462 aaPredicted RBP9.16□□□□□ -0.94
CHFR-219ENST00000541341 TCFL5Q9UL49 500 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 TMED7Q9Y3B3 224 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 ITPR2Q14571 2701 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 IGLV3-12A0A075B6K2 115 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 FAM171A2A8MVW0 826 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 PRR32B1ATL7 298 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 NPIPA5E9PKD4 350 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 HSPA12AO43301 675 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 SRSF10O75494 262 aaKnown RBP9.15□□□□□ -0.94
CHFR-219ENST00000541341 UTS2O95399 124 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 F13BP05160 661 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 ACAA1P09110 424 aaPredicted RBP9.15□□□□□ -0.94
CHFR-219ENST00000541341 HIST1H1DP16402 221 aaKnown RBP9.15□□□□□ -0.94
CHFR-219ENST00000541341 AMY2BP19961 511 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 LAP3P28838 519 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 ZNF93P35789 620 aaPredicted RBP9.15□□□□□ -0.94
CHFR-219ENST00000541341 SLC26A5P58743 744 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 IL13RA2Q14627 380 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 MELKQ14680 651 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 ACKR1Q16570 336 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 BEX5Q5H9J7 111 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 NPSR1Q6W5P4 371 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 TTLL10Q6ZVT0 673 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 PRSS41Q7RTY9 318 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 ZNF101Q8IZC7 436 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 PAQR4Q8N4S7 273 aaPredicted RBP9.15□□□□□ -0.94
CHFR-219ENST00000541341 ZNF615Q8N8J6 731 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 POC1AQ8NBT0 407 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 OR51A4Q8NGJ6 313 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 OR4C3Q8NH37 302 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 ZPLD1Q8TCW7 415 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 SLC25A43Q8WUT9 341 aaPredicted RBP9.15□□□□□ -0.94
CHFR-219ENST00000541341 RNF133Q8WVZ7 376 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 ST8SIA1Q92185 356 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 TAAR8Q969N4 342 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 HIST1H2BAQ96A08 127 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 ARSGQ96EG1 525 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 MOGAT1Q96PD6 335 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 SYT3Q9BQG1 590 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 SUCNR1Q9BXA5 334 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 TBL1XR1Q9BZK7 514 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 TOLLIPQ9H0E2 274 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 ARV1Q9H2C2 271 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 RYDENQ9NUL5 291 aaKnown RBP9.15□□□□□ -0.94
CHFR-219ENST00000541341 NPIPA1Q9UND3 350 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 SLC22A13Q9Y226 551 aa9.15□□□□□ -0.94
CHFR-219ENST00000541341 CENPEQ02224 2701 aa9.15□□□□□ -0.95
CHFR-219ENST00000541341 LRBAP50851 2863 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 SEC14L6B5MCN3 397 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 ALG1L2C9J202 215 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 CCSO14618 274 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 GPR137BO60478 399 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 IGHV2-5P01817 119 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 HBE1P02100 147 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 CTSDP07339 412 aaPredicted RBP9.14□□□□□ -0.95
CHFR-219ENST00000541341 DANCRP0C864 163 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 CD80P33681 288 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 SNCAP37840 140 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 QRFPP83859 136 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 DEFA6Q01524 100 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 FABP9Q0Z7S8 132 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 IL15RAQ13261 267 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 ARFRP1Q13795 201 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 ZNF266Q14584 549 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 MST1LQ2TV78 715 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 CHRFAM7AQ494W8 412 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 FAM209BQ5JX69 171 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 C1orf140Q5VVS0 124 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 TMEM268Q5VZI3 342 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 MRPL14Q6P1L8 145 aaKnown RBP9.14□□□□□ -0.95
CHFR-219ENST00000541341 ZNF529Q6P280 563 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 CORO6Q6QEF8 472 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 SLC22A25Q6T423 547 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 ZNF600Q6ZNG1 722 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 COX15Q7KZN9 410 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 LHFPL1Q86WI0 220 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 ZSCAN4Q8NAM6 433 aaPredicted RBP9.14□□□□□ -0.95
CHFR-219ENST00000541341 ACBD4Q8NC06 268 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 OR9A4Q8NGU2 314 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 OR2AJ1Q8NGZ0 328 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 OR10AC1Q8NH08 325 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 MFSD8Q8NHS3 518 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 MARCH1Q8TCQ1 289 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 DAZLQ92904 295 aaKnown RBP9.14□□□□□ -0.95
CHFR-219ENST00000541341 INTS12Q96CB8 462 aaKnown RBP9.14□□□□□ -0.95
CHFR-219ENST00000541341 SNRNP40Q96DI7 357 aaKnown RBP9.14□□□□□ -0.95
CHFR-219ENST00000541341 TSSK2Q96PF2 358 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 PFDN5Q99471 154 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 TMEM59Q9BXS4 323 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 TGIF2Q9GZN2 237 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 ACKR4Q9NPB9 350 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 G6PC2Q9NQR9 355 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms