RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 MS4A5Q9H3V2 200 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 KCNK15Q9H427 330 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 CNTD2Q9H8S5 307 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 ABCB9Q9NP78 766 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 C14orf119Q9NWQ9 140 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 IL19Q9UHD0 177 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 PMF1-BGLAPU3KQ54 211 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 IGKV1-12A0A0C4DH73 117 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 MEGF11A6BM72 1044 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 TRIM64BA6NI03 449 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 OR5B21A6NL26 309 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 LYNX1G3V0Z9 82 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 ZNF701M0R085 212 aaPredicted RBP7.89□□□□□ -1.15
DDX55-208ENST00000541259 OVOL3O00110 214 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 CDIPTO14735 213 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 SYNGR1O43759 233 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 ANGPTL7O43827 346 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 RHBDL1O75783 438 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 LY6HO94772 140 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 IGKV1D-12P01611 117 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 ERCC1P07992 297 aaPredicted RBP7.89□□□□□ -1.15
DDX55-208ENST00000541259 CD55P08174 381 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 LYNX1P0DP58 116 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 TNFSF4P23510 183 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 POU3F4P49335 361 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 SRP9P49458 86 aaKnown RBP7.89□□□□□ -1.15
DDX55-208ENST00000541259 CLDN12P56749 244 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 PDZK1IP1Q13113 114 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 C1orf100Q5SVJ3 147 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 GLT8D1Q68CQ7 371 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 FAM166AQ6J272 317 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 SFXN4Q6P4A7 337 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 HAGHLQ6PII5 290 aaPredicted RBP7.89□□□□□ -1.15
DDX55-208ENST00000541259 C20orf204Q6ZNR8 217 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 MOGAT3Q86VF5 341 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 SPERTQ8NA61 448 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 AQP3Q92482 292 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 SLC25A28Q96A46 364 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 SLC25A46Q96AG3 418 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 ZNF488Q96MN9 340 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 DIRC2Q96SL1 478 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 CCL19Q99731 98 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 DCUN1D5Q9BTE7 237 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 FAM192AQ9GZU8 254 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 METTL17Q9H7H0 456 aaPredicted RBP7.89□□□□□ -1.15
DDX55-208ENST00000541259 GCM1Q9NP62 436 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 C1orf123Q9NWV4 160 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 DCAF16Q9NXF7 216 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 NKIRAS2Q9NYR9 191 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 ING4Q9UNL4 249 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 NOP16Q9Y3C1 178 aaKnown RBP7.89□□□□□ -1.15
DDX55-208ENST00000541259 CACNG2Q9Y698 323 aa7.89□□□□□ -1.15
DDX55-208ENST00000541259 DOCK11Q5JSL3 2073 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 LRP5LA4QPB2 252 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 A6NLC8 198 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 TMEM210A6NLX4 147 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 IFITM5A6NNB3 132 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 NOTOA8MTQ0 251 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 F8VVB4 439 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 F8VWA3 439 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 SLC17A2O00624 439 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 TPD52L2O43399 206 aaKnown RBP7.88□□□□□ -1.15
DDX55-208ENST00000541259 CDC14BO60729 498 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 PTBP3O95758 552 aaKnown RBP7.88□□□□□ -1.15
DDX55-208ENST00000541259 TMEM225BP0DP42 221 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 ZNF182P17025 639 aaPredicted RBP7.88□□□□□ -1.15
DDX55-208ENST00000541259 COL8A2P25067 703 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 HTR2CP28335 458 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 PTGFRP43088 359 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 PLA2G7Q13093 441 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 PCGF3Q3KNV8 242 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 FAM209AQ5JX71 171 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 IDNKQ5T6J7 187 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 GLIPR1L1Q6UWM5 242 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 SLC25A26Q70HW3 274 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 ZNF573Q86YE8 665 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 CDH26Q8IXH8 852 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 CELF2-AS1Q8N7Q2 184 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 NKAIN3Q8N8D7 197 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 OR51F2Q8NH61 342 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 TNFAIP8L1Q8WVP5 186 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 SLAMF9Q96A28 289 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 FOXRED1Q96CU9 486 aaPredicted RBP7.88□□□□□ -1.15
DDX55-208ENST00000541259 C1orf147Q96MC9 270 aaPredicted RBP7.88□□□□□ -1.15
DDX55-208ENST00000541259 RAB1BQ9H0U4 201 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 TLNRD1Q9H1K6 362 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 SAP30LQ9HAJ7 183 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 LIN7BQ9HAP6 207 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 PLGRKTQ9HBL7 147 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 NEK6Q9HC98 313 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 DECR2Q9NUI1 292 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 MTCH1Q9NZJ7 389 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 DAPK2Q9UIK4 370 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 MRPS28Q9Y2Q9 187 aaKnown RBP7.88□□□□□ -1.15
DDX55-208ENST00000541259 ITPR2Q14571 2701 aa7.88□□□□□ -1.15
DDX55-208ENST00000541259 A0A1W2PP11 408 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 H7C417 338 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 J3QT63 122 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 AIPO00170 330 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 CYB5R3P00387 301 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms