RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 GUCA1AP43080 201 aaPredicted RBP10.94□□□□□ -0.66
RNF4-222ENST00000541204 CSNK1A1P48729 337 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 HOXA1P49639 335 aaPredicted RBP10.94□□□□□ -0.66
RNF4-222ENST00000541204 DOK3Q7L591 496 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.94□□□□□ -0.66
RNF4-222ENST00000541204 OR14K1Q8NGZ2 314 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 OR14L1PQ8NHC6 308 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 SSC4DQ8WTU2 575 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 SMIM8Q96KF7 97 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 SRXN1Q9BYN0 137 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 ZFP57Q9NU63 452 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 LNP1A1A4G5 178 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 STMND1H3BQB6 276 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 TLX3O43711 291 aaPredicted RBP10.94□□□□□ -0.66
RNF4-222ENST00000541204 HPNP05981 417 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 JMJD7P0C870 316 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 PET100P0DJ07 73 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 SPP1P10451 314 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 CCL1P22362 96 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 PTGFRP43088 359 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 CBX5P45973 191 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 CAV2P51636 162 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 PDZK1IP1Q13113 114 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 IL15RAQ13261 267 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 OR2A2Q6IF42 318 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 CRIP3Q6Q6R5 217 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 ZFP82Q8N141 532 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 PNLDC1Q8NA58 520 aaKnown RBP10.94□□□□□ -0.66
RNF4-222ENST00000541204 ADPRHL1Q8NDY3 354 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 RXFP4Q8TDU9 374 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 CMSS1Q9BQ75 279 aaKnown RBP10.94□□□□□ -0.66
RNF4-222ENST00000541204 ZNF701Q9NV72 531 aaPredicted RBP10.94□□□□□ -0.66
RNF4-222ENST00000541204 OR5H15A6NDH6 313 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 FBXO24O75426 580 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 P04436 131 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 CRYBA1P05813 215 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 HKR1P10072 659 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 ID4P47928 161 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 TAS2R46P59540 309 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 CHRFAM7AQ494W8 412 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 C6orf15Q6UXA7 325 aaPredicted RBP10.94□□□□□ -0.66
RNF4-222ENST00000541204 DTX1Q86Y01 620 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 FAM89BQ8N5H3 189 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 LYZL4Q96KX0 146 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 PECRQ9BY49 303 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 TTC28Q96AY4 2481 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 URB1O60287 2271 aaKnown RBP10.93□□□□□ -0.66
RNF4-222ENST00000541204 IGKV1D-8A0A087WSZ0 117 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 SFTA3P0C7M3 94 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 PTGER4P35408 488 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 PRSS12P56730 875 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 H3F3AP84243 136 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 MYO7BQ6PIF6 2116 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 SAT2Q96F10 170 aaPredicted RBP10.93□□□□□ -0.66
RNF4-222ENST00000541204 PGAM5Q96HS1 289 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 C12orf57Q99622 126 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 ELL3Q9HB65 397 aaPredicted RBP10.93□□□□□ -0.66
RNF4-222ENST00000541204 DNAJB11Q9UBS4 358 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 FOXI3A8MTJ6 420 aaPredicted RBP10.93□□□□□ -0.66
RNF4-222ENST00000541204 RNASEK-C17orf49H0YIS7 233 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 CBR3O75828 277 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 CYC1P08574 325 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 ACP1P24666 158 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 SPEM2Q0P670 501 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 UBE2V2Q15819 145 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 FAM189A2Q15884 450 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 PLXDC2Q6UX71 529 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 OR9K2Q8NGE7 335 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 GLYATL2Q8WU03 294 aa10.93□□□□□ -0.66
RNF4-222ENST00000541204 EMG1Q92979 244 aaKnown RBP10.93□□□□□ -0.66
RNF4-222ENST00000541204 PRRC2CQ9Y520 2896 aaKnown RBP10.92□□□□□ -0.66
RNF4-222ENST00000541204 A0A087WZY1 265 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 MEX3AA1L020 520 aaKnown RBP10.92□□□□□ -0.66
RNF4-222ENST00000541204 FIGNL2A6NMB9 653 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 DBHP09172 617 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 FAHP16930 419 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 ZNF708P17019 499 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 KCNJ3P48549 501 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 ECH1Q13011 328 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 RBM39Q14498 530 aaKnown RBP10.92□□□□□ -0.66
RNF4-222ENST00000541204 HIST3H3Q16695 136 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 IAH1Q2TAA2 248 aaPredicted RBP10.92□□□□□ -0.66
RNF4-222ENST00000541204 WIPI1Q5MNZ9 446 aaPredicted RBP10.92□□□□□ -0.66
RNF4-222ENST00000541204 ACER2Q5QJU3 275 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 SPINK14Q6IE38 97 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 C6orf201Q7Z4U5 140 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 SH2D2AQ9NP31 389 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 P4HTMQ9NXG6 502 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 PLA2G2EQ9NZK7 142 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 C14orf166Q9Y224 244 aaKnown RBP10.92□□□□□ -0.66
RNF4-222ENST00000541204 NCOA6Q14686 2063 aaPredicted RBP10.92□□□□□ -0.66
RNF4-222ENST00000541204 C9JQL5 133 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 IFNA2P01563 188 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 FCGR2AP12318 317 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 CD80P33681 288 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 GRB2P62993 217 aaKnown RBP10.92□□□□□ -0.66
RNF4-222ENST00000541204 AKIRIN2Q53H80 203 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 PIGTQ969N2 578 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 PIGQQ9BRB3 760 aa10.92□□□□□ -0.66
RNF4-222ENST00000541204 HDHD3Q9BSH5 251 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms