RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SAXO1Q8IYX7 474 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 SPARTQ8N0X7 666 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 ZSCAN4Q8NAM6 433 aaPredicted RBP15.73■□□□□ 0.11
VPS33A-205ENST00000541169 OR8B3Q8NGG8 313 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 OR13C9Q8NGT0 318 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 TRMT10AQ8TBZ6 339 aaKnown RBP15.73■□□□□ 0.11
VPS33A-205ENST00000541169 TMIGD2Q96BF3 282 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 NEIL1Q96FI4 390 aaPredicted RBP15.73■□□□□ 0.11
VPS33A-205ENST00000541169 OR8B2Q96RD0 313 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 TMEM246Q9BRR3 403 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 NARFLQ9H6Q4 476 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 KAAG1Q9UBP8 84 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 F8P00451 2351 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 PPIAL4CA0A0B4J2A2 164 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 MEGF11A6BM72 1044 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 CEACAM18A8MTB9 384 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 HCKP08631 526 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 PGA5P0DJD9 388 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 RPS2P15880 293 aaKnown RBP15.72■□□□□ 0.11
VPS33A-205ENST00000541169 GLRA1P23415 457 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 GATA3P23771 443 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 DOC2BQ14184 412 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 ESCO2Q56NI9 601 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 ATPAF1Q5TC12 328 aaPredicted RBP15.72■□□□□ 0.11
VPS33A-205ENST00000541169 UBE2UQ5VVX9 321 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 FAM166AQ6J272 317 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 FIP1L1Q6UN15 594 aaKnown RBP15.72■□□□□ 0.11
VPS33A-205ENST00000541169 SLC36A1Q7Z2H8 476 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 BOLLQ8N9W6 283 aaKnown RBP15.72■□□□□ 0.11
VPS33A-205ENST00000541169 MAPK1IP1LQ8NDC0 245 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 OR51F2Q8NH61 342 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 MED30Q96HR3 178 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 NRIP2Q9BQI9 281 aa15.72■□□□□ 0.11
VPS33A-205ENST00000541169 YLPM1P49750 1951 aaKnown RBP15.72■□□□□ 0.11
VPS33A-205ENST00000541169 TRBV5-7A0A0A0MS05 114 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 TRAV20A0A0B4J274 112 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 PNMA8CA0A1B0GUJ8 204 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 F5H0A9 414 aaPredicted RBP15.71■□□□□ 0.11
VPS33A-205ENST00000541169 C3orf80F5H4A9 247 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 WNT9BO14905 357 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 GPR37O15354 613 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 MSMBP08118 114 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 WNT2P09544 360 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 GALP22466 123 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 GABRA5P31644 462 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 TGFBR2P37173 567 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 RANBP1P43487 201 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 BMXP51813 675 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 DVL1P1P54792 670 aaPredicted RBP15.71■□□□□ 0.11
VPS33A-205ENST00000541169 KISS1Q15726 138 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 LIPKQ5VXJ0 399 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 PHC2Q8IXK0 858 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 PNLDC1Q8NA58 520 aaKnown RBP15.71■□□□□ 0.11
VPS33A-205ENST00000541169 NPRL2Q8WTW4 380 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 CEP19Q96LK0 163 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 DERL3Q96Q80 235 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 OR14A2Q96R54 314 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 VCX3AQ9NNX9 186 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 TMEM160Q9NX00 188 aa15.71■□□□□ 0.11
VPS33A-205ENST00000541169 POLR3KQ9Y2Y1 108 aaPredicted RBP15.71■□□□□ 0.11
VPS33A-205ENST00000541169 NKX6-3A6NJ46 265 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 A8MXK9 166 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 AKR7A2O43488 359 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 RHBDL1O75783 438 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 ARL6IP5O75915 188 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 NXPH2O95156 264 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 LY6G6DO95868 133 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 IGFBP3P17936 291 aaPredicted RBP15.7■□□□□ 0.1
VPS33A-205ENST00000541169 BDKRB2P30411 391 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 MAP2K4P45985 399 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 PDZK1IP1Q13113 114 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 ACSM3Q53FZ2 586 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 SFRP4Q6FHJ7 346 aaPredicted RBP15.7■□□□□ 0.1
VPS33A-205ENST00000541169 UNQ9370/PRO34162Q6UXP9 181 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 SLC25A26Q70HW3 274 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 GLCCI1Q86VQ1 547 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 ANGPTL5Q86XS5 388 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 CALHM1Q8IU99 346 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 TEX29Q8N6K0 151 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 NKAIN3Q8N8D7 197 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 MSI2Q96DH6 328 aaKnown RBP15.7■□□□□ 0.1
VPS33A-205ENST00000541169 METTL17Q9H7H0 456 aaPredicted RBP15.7■□□□□ 0.1
VPS33A-205ENST00000541169 SEBOXQ9HB31 216 aaPredicted RBP15.7■□□□□ 0.1
VPS33A-205ENST00000541169 HES4Q9HCC6 221 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 PCDHB16Q9NRJ7 776 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 NLKQ9UBE8 527 aa15.7■□□□□ 0.1
VPS33A-205ENST00000541169 AKAP9Q99996 3911 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 IGKV1-27A0A075B6S5 117 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 A0A087WXM4 84 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 OR2AT4A6NND4 320 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 TRAPPC2LH3BP13 241 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.69■□□□□ 0.1
VPS33A-205ENST00000541169 TNFRSF13BO14836 293 aaPredicted RBP15.69■□□□□ 0.1
VPS33A-205ENST00000541169 SC5DO75845 299 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 TGFAP01135 160 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 IL2RGP31785 369 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 CD80P33681 288 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 ERVK11-1P61568 191 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 ARMCX4Q5H9R4 360 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 DMRTC1Q5HYR2 192 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms