RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 FA2HQ7L5A8 372 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 Q8IYB0 196 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 ATP5SQ99766 215 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 NRIP2Q9BQI9 281 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 OR51M1Q9H341 326 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 FKBP11Q9NYL4 201 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 OR5H15A6NDH6 313 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 OR5H1A6NKK0 313 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 ZBTB25P24278 435 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 FOXF1Q12946 379 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 FAM209BQ5JX69 171 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 BATF2Q8N1L9 274 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 GALMQ96C23 342 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 NDFIP1Q9BT67 221 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 FAM74A7A6NL05 159 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 CDK2AP1O14519 115 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 SPRY1O43609 319 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 HLA-DQB1P01920 261 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 OR5G3P0C626 314 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 OR5AC1P0C628 307 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 CXCL12P48061 93 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 DPPA3Q6W0C5 159 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 LIPGQ9Y5X9 500 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 ZNF25P17030 456 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 TMEM267Q0VDI3 215 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 UBE2V2Q15819 145 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 ADPRHL1Q8NDY3 354 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 COMMD5Q9GZQ3 224 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 RAB33BQ9H082 229 aa13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-207ENST00000541122 IGHV3-20A0A0C4DH32 117 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 SLC31A2O15432 143 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 PLRG1O43660 514 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 WISP3O95389 354 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 DEFA4P12838 97 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 KCNAB1Q14722 419 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 RAB24Q969Q5 203 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 ASB16Q96NS5 453 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 UBE2ZQ9H832 354 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 OCIAD1Q9NX40 245 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 PRSS50Q9UI38 385 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 VAX2Q9UIW0 290 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 SLC45A2Q9UMX9 530 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 CDC34P49427 236 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 RPS23P62266 143 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 CLN3Q13286 438 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 ZNF468Q5VIY5 522 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 FAM78BQ5VT40 261 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 KMT5CQ86Y97 462 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 RHBDD1Q8TEB9 315 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 IL22RA2Q969J5 263 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 ZNF707Q96C28 371 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 TMEM147Q9BVK8 224 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 VN1R1Q9GZP7 353 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 CA10Q9NS85 328 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 LANCL2Q9NS86 450 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 COX7A2P2O60397 106 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 Q6ZN92 141 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 TMEM178AQ8NBL3 297 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 MRPS24Q96EL2 167 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 MEGF10Q96KG7 1140 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 PPM1DO15297 605 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 PDCD6O75340 191 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 HPP00738 406 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 CRISP2P16562 243 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 CCR5P51681 352 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 IGFBP7Q16270 282 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 OR1F12Q8NHA8 337 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 PTX4Q96A99 478 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 SNX22Q96L94 193 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 GINS3Q9BRX5 216 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 GSX1Q9H4S2 264 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 IL21Q9HBE4 155 aa13.35□□□□□ -0.27
SMARCA4-207ENST00000541122 LOC102723971A0A1B0GUV8 181 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 C5orf49A4QMS7 147 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 KIAA1324LA8MWY0 1029 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 H3BQ15 152 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 STUMQ69YW2 141 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 RGS7BPQ6MZT1 257 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 MRGPREQ86SM8 312 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 OR10C1Q96KK4 312 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 XIRP1Q702N8 1843 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 MPTX1A8MV57 137 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 HLA-GP17693 338 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 GPM6AP51674 278 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 PRICKLE4Q2TBC4 344 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 OTPQ5XKR4 325 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 TMEM104Q8NE00 496 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 APOBEC3DQ96AK3 386 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 ITGB4P16144 1822 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 ECM29Q5VYK3 1845 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 MDH2P40926 338 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 SULT1A2P50226 295 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 ASCL1P50553 236 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 RRADP55042 308 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 OR1D5P58170 312 aa13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 RNASEKQ6P5S7 137 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 NUFIP2Q7Z417 695 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-207ENST00000541122 OR5AS1Q8N127 324 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms