RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 TMED1Q13445 227 aa10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 CLVS2Q5SYC1 327 aa10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 PLCXD3Q63HM9 321 aa10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 HAGHLQ6PII5 290 aaPredicted RBP10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 ZNF573Q86YE8 665 aa10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 PDZD9Q8IXQ8 264 aa10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 C11orf42Q8N5U0 333 aa10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 H1FXQ92522 213 aaKnown RBP10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 NRIP2Q9BQI9 281 aa10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 OSBPL10Q9BXB5 764 aa10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 GABARAPL3Q9BY60 117 aa10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 TNFRSF19Q9NS68 423 aa10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 WARS2Q9UGM6 360 aaKnown RBP10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 IKZF2Q9UKS7 526 aa10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 FAM96BQ9Y3D0 163 aa10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 WNK1Q9H4A3 2382 aa10.72□□□□□ -0.69
SEMA4D-223ENST00000540475 E9PQ18 207 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 ZNF670-ZNF695F2Z2N8 137 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 J3QT63 122 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 M0R129 80 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 MAGEB4O15481 346 aaPredicted RBP10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 SYNGR1O43759 233 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 SULT1C4O75897 302 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 TSPAN9O75954 239 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 OR2T7P0C7T2 308 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 EEF1B2P24534 225 aaKnown RBP10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 HTR1FP30939 366 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 GABRA2P47869 451 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 DLX1P56177 255 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 KRTAP10-3P60369 221 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 ERVK11-1P61568 191 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 MIDNQ504T8 468 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 BCL2L15Q5TBC7 163 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 SSX6Q7RTT6 188 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 ZNF561Q8N587 486 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 CD177Q8N6Q3 437 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 BEND2Q8NDZ0 799 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 OR5D13Q8NGL4 314 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 OR2T27Q8NH04 317 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 CIB1Q99828 191 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 MEGF9Q9H1U4 602 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 SEMA6AQ9H2E6 1030 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 VPREB3Q9UKI3 123 aa10.71□□□□□ -0.69
SEMA4D-223ENST00000540475 RFPL4AA6NLU0 287 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 RFPL4AL1F8VTS6 287 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 NDUFB7P17568 137 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 PRDX2P32119 198 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 SAA4P35542 130 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 POLR2IP36954 125 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 HAAOP46952 286 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 ISL1P61371 349 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 SRSF4Q08170 494 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 IL24Q13007 206 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 KLRD1Q13241 179 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 BLMHQ13867 455 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 AANATQ16613 207 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 SMIM21Q3B7S5 101 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 DMRTC1Q5HYR2 192 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 C17orf107Q6ZR85 190 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 Q6ZSV7 163 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 AMIGO2Q86SJ2 522 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 COMMD2Q86X83 199 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 CATSPERDQ86XM0 798 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 CALHM1Q8IU99 346 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 CCDC54Q8NEL0 328 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 OR51G2Q8NGK0 314 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 OR8J1Q8NGP2 316 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 OR5R1Q8NH85 324 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 RORBQ92753 470 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 RNF166Q96A37 237 aaPredicted RBP10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 CENPNQ96H22 339 aaPredicted RBP10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 IL4I1Q96RQ9 567 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 TTTY10Q9BZA0 68 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 PKIBQ9C010 78 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 FAM234AQ9H0X4 552 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 SEBOXQ9HB31 216 aaPredicted RBP10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 SLC22A13Q9Y226 551 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 POLDIP2Q9Y2S7 368 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 SF3B6Q9Y3B4 125 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 RNF114Q9Y508 228 aa10.7□□□□□ -0.7
SEMA4D-223ENST00000540475 A0A1W2PQL4 384 aaPredicted RBP10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 MEIOCA2RUB1 952 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 METTL15A6NJ78 407 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 KRT8P05787 483 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 TGFBR2P37173 567 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 PRB3Q04118 309 aaPredicted RBP10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 SLC25A30Q5SVS4 291 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 C1orf146Q5VVC0 180 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 TMEM200BQ69YZ2 307 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 CRIP3Q6Q6R5 217 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 PLEKHG7Q6ZR37 379 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 PNKDQ8N490 385 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 TRUB1Q8WWH5 349 aaKnown RBP10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 EME1Q96AY2 570 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 C10orf35Q96D05 121 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 ZNF488Q96MN9 340 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 ELL3Q9HB65 397 aaPredicted RBP10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 GPR173Q9NS66 373 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 C19orf12Q9NSK7 152 aa10.69□□□□□ -0.7
SEMA4D-223ENST00000540475 A0A1W2PQ09 198 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms