RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 PDZK1IP1Q13113 114 aa16■□□□□ 0.15
TNFRSF1A-213ENST00000540022 IDNKQ5T6J7 187 aa16■□□□□ 0.15
TNFRSF1A-213ENST00000540022 PNLDC1Q8NA58 520 aaKnown RBP16■□□□□ 0.15
TNFRSF1A-213ENST00000540022 OR6M1Q8NGM8 313 aa16■□□□□ 0.15
TNFRSF1A-213ENST00000540022 TNFAIP8L1Q8WVP5 186 aa16■□□□□ 0.15
TNFRSF1A-213ENST00000540022 AQP3Q92482 292 aa16■□□□□ 0.15
TNFRSF1A-213ENST00000540022 TLNRD1Q9H1K6 362 aa16■□□□□ 0.15
TNFRSF1A-213ENST00000540022 STEAP1Q9UHE8 339 aa16■□□□□ 0.15
TNFRSF1A-213ENST00000540022 RAI1Q7Z5J4 1906 aaPredicted RBP16■□□□□ 0.15
TNFRSF1A-213ENST00000540022 TPD52L2O43399 206 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SYNGR1O43759 233 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 ANGPTL7O43827 346 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 RHBDL1O75783 438 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 TMEM225BP0DP42 221 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 RBMXP38159 391 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 GATA4P43694 442 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 RIN1Q13671 783 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 P2RY14Q15391 338 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 RAB11BQ15907 218 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 PCGF3Q3KNV8 242 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 ZNF826PQ6ZT77 177 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SLC25A26Q70HW3 274 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 PKIBQ9C010 78 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 DECR2Q9NUI1 292 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 CCDC59Q9P031 241 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 ITGB1BP2Q9UKP3 347 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 MRPS28Q9Y2Q9 187 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 IGKV1-12A0A0C4DH73 117 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 A6NLC8 198 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 J3QT63 122 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 IGKV1D-12P01611 117 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 HPXP02790 462 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 MPZP25189 248 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 CDKN1AP38936 164 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 AWAT2Q6E213 333 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 GLIPR1L1Q6UWM5 242 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 CROCCP3Q8IVE0 287 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 OR51D1Q8NGF3 324 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 C1orf147Q96MC9 270 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SLIRPQ9GZT3 109 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SAP30LQ9HAJ7 183 aa15.99■□□□□ 0.15
TNFRSF1A-213ENST00000540022 HIVEP1P15822 2718 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 PRRC2AP48634 2157 aaKnown RBP15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 H7C417 338 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 OVOL3O00110 214 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SOX6P35712 828 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 PMELP40967 661 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 IL24Q13007 206 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 TESK1Q15569 626 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 WDR82Q6UXN9 313 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 ASCL4Q6XD76 172 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 MOGAT3Q86VF5 341 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 OR51F2Q8NH61 342 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 EGLN1Q9GZT9 426 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 KCNK15Q9H427 330 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 LIN7BQ9HAP6 207 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 GCM1Q9NP62 436 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 C1orf123Q9NWV4 160 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 MTCH1Q9NZJ7 389 aa15.98■□□□□ 0.15
TNFRSF1A-213ENST00000540022 PAHP00439 452 aa15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SNRPBP14678 240 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 TNFRSF1AP19438 455 aa15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 DGUOKQ16854 277 aa15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 TGIF2LYQ8IUE0 185 aa15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 ZSCAN4Q8NAM6 433 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 PXT1Q8NFP0 134 aa15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 OR10K1Q8NGX5 313 aa15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SLAMF9Q96A28 289 aa15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 FAM3DQ96BQ1 224 aa15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 CCL19Q99731 98 aa15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 RAB1BQ9H0U4 201 aa15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 TREM2Q9NZC2 230 aa15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 ING4Q9UNL4 249 aa15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 ZNF469Q96JG9 3925 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1A-213ENST00000540022 C3orf80F5H4A9 247 aa15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 NPBWR2P48146 333 aa15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 C2orf76Q3KRA6 126 aa15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 MKXQ8IYA7 352 aa15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SAXO1Q8IYX7 474 aa15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 BATF2Q8N1L9 274 aa15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 ZNF671Q8TAW3 534 aa15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 TBC1D15Q8TC07 691 aa15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 ZNF488Q96MN9 340 aa15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 FN3KRPQ9HA64 309 aa15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SMURF1Q9HCE7 757 aa15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 OR5V1Q9UGF6 321 aa15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 PPP1R3CQ9UQK1 317 aa15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 CACNG2Q9Y698 323 aa15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 MAP1AP78559 2803 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1A-213ENST00000540022 A0A1W2PP11 408 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 F8VVB4 439 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 F8VWA3 439 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 TMEM127O75204 238 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 NDUFS7O75251 213 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 SFTPBP07988 381 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 VSIG8P0DPA2 414 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ARSBP15848 533 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 HOXA4Q00056 320 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 OR10K2Q6IF99 312 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 OR5H6Q8NGV6 325 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms