RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ARHGAP5-AS1Q96IT6 56 aa8.81□□□□□ -1
SPARC-209ENST00000539687 TRIB1Q96RU8 372 aa8.81□□□□□ -1
SPARC-209ENST00000539687 NKX3-1Q99801 234 aaPredicted RBP8.81□□□□□ -1
SPARC-209ENST00000539687 TMEM246Q9BRR3 403 aa8.81□□□□□ -1
SPARC-209ENST00000539687 NICN1Q9BSH3 213 aa8.81□□□□□ -1
SPARC-209ENST00000539687 PECRQ9BY49 303 aa8.81□□□□□ -1
SPARC-209ENST00000539687 TMPRSS13Q9BYE2 586 aa8.81□□□□□ -1
SPARC-209ENST00000539687 TINAGL1Q9GZM7 467 aaPredicted RBP8.81□□□□□ -1
SPARC-209ENST00000539687 POFUT1Q9H488 388 aa8.81□□□□□ -1
SPARC-209ENST00000539687 C12orf49Q9H741 205 aa8.81□□□□□ -1
SPARC-209ENST00000539687 DLL4Q9NR61 685 aa8.81□□□□□ -1
SPARC-209ENST00000539687 PLEKHJ1Q9NW61 149 aa8.81□□□□□ -1
SPARC-209ENST00000539687 PLA2G2EQ9NZK7 142 aa8.81□□□□□ -1
SPARC-209ENST00000539687 PRSS50Q9UI38 385 aa8.81□□□□□ -1
SPARC-209ENST00000539687 KCNK7Q9Y2U2 307 aa8.81□□□□□ -1
SPARC-209ENST00000539687 PCNX2A6NKB5 2137 aa8.81□□□□□ -1
SPARC-209ENST00000539687 ALPK2Q86TB3 2170 aa8.8□□□□□ -1
SPARC-209ENST00000539687 PHF3Q92576 2039 aaKnown RBP8.8□□□□□ -1
SPARC-209ENST00000539687 LOC100509620A0A075B734 347 aa8.8□□□□□ -1
SPARC-209ENST00000539687 A0A0A6YYD4 124 aa8.8□□□□□ -1
SPARC-209ENST00000539687 C5orf63A6NC05 138 aa8.8□□□□□ -1
SPARC-209ENST00000539687 CEACAM18A8MTB9 384 aa8.8□□□□□ -1
SPARC-209ENST00000539687 F5H5P2 479 aa8.8□□□□□ -1
SPARC-209ENST00000539687 M0QYG6 137 aa8.8□□□□□ -1
SPARC-209ENST00000539687 RRP8O43159 456 aaKnown RBP8.8□□□□□ -1
SPARC-209ENST00000539687 SSX5O60225 188 aa8.8□□□□□ -1
SPARC-209ENST00000539687 OR2A4O95047 310 aa8.8□□□□□ -1
SPARC-209ENST00000539687 HOXD4P09016 255 aaPredicted RBP8.8□□□□□ -1
SPARC-209ENST00000539687 OR4E1P0C645 316 aa8.8□□□□□ -1
SPARC-209ENST00000539687 CCNOP22674 350 aa8.8□□□□□ -1
SPARC-209ENST00000539687 HRH1P35367 487 aa8.8□□□□□ -1
SPARC-209ENST00000539687 TMEM50BP56557 158 aa8.8□□□□□ -1
SPARC-209ENST00000539687 TSPAN5P62079 268 aa8.8□□□□□ -1
SPARC-209ENST00000539687 GUSBP1Q15486 140 aa8.8□□□□□ -1
SPARC-209ENST00000539687 CHRFAM7AQ494W8 412 aa8.8□□□□□ -1
SPARC-209ENST00000539687 NHLRC3Q5JS37 347 aa8.8□□□□□ -1
SPARC-209ENST00000539687 PLAC9Q5JTB6 97 aa8.8□□□□□ -1
SPARC-209ENST00000539687 SLC25A42Q86VD7 318 aa8.8□□□□□ -1
SPARC-209ENST00000539687 C12orf45Q8N5I9 185 aaPredicted RBP8.8□□□□□ -1
SPARC-209ENST00000539687 SLC30A7Q8NEW0 376 aa8.8□□□□□ -1
SPARC-209ENST00000539687 Q8NFD4 153 aa8.8□□□□□ -1
SPARC-209ENST00000539687 OR56B2PQ8NGI1 322 aa8.8□□□□□ -1
SPARC-209ENST00000539687 OR2T35Q8NGX2 323 aa8.8□□□□□ -1
SPARC-209ENST00000539687 TERB2Q8NHR7 220 aa8.8□□□□□ -1
SPARC-209ENST00000539687 CMBLQ96DG6 245 aa8.8□□□□□ -1
SPARC-209ENST00000539687 OR2A7Q96R45 310 aa8.8□□□□□ -1
SPARC-209ENST00000539687 DHRS9Q9BPW9 319 aa8.8□□□□□ -1
SPARC-209ENST00000539687 SEC22CQ9BRL7 303 aa8.8□□□□□ -1
SPARC-209ENST00000539687 PAPOLGQ9BWT3 736 aaKnown RBP8.8□□□□□ -1
SPARC-209ENST00000539687 BEX1Q9HBH7 125 aa8.8□□□□□ -1
SPARC-209ENST00000539687 CDH20Q9HBT6 801 aa8.8□□□□□ -1
SPARC-209ENST00000539687 SPACA1Q9HBV2 294 aa8.8□□□□□ -1
SPARC-209ENST00000539687 MGAT4AQ9UM21 535 aa8.8□□□□□ -1
SPARC-209ENST00000539687 HSPB11Q9Y547 144 aa8.8□□□□□ -1
SPARC-209ENST00000539687 SPTBN2O15020 2390 aa8.8□□□□□ -1
SPARC-209ENST00000539687 CACNA1CQ13936 2221 aa8.8□□□□□ -1
SPARC-209ENST00000539687 GPR179Q6PRD1 2367 aa8.79□□□□□ -1
SPARC-209ENST00000539687 A0A0B4J2A0 478 aa8.79□□□□□ -1
SPARC-209ENST00000539687 PQLC2LA1A4F0 135 aa8.79□□□□□ -1
SPARC-209ENST00000539687 WIPF3A6NGB9 483 aa8.79□□□□□ -1
SPARC-209ENST00000539687 POM121CA8CG34 1229 aa8.79□□□□□ -1
SPARC-209ENST00000539687 MKRN2OSH3BPM6 223 aa8.79□□□□□ -1
SPARC-209ENST00000539687 GPR37O15354 613 aa8.79□□□□□ -1
SPARC-209ENST00000539687 EFSO43281 561 aa8.79□□□□□ -1
SPARC-209ENST00000539687 WDR1O75083 606 aa8.79□□□□□ -1
SPARC-209ENST00000539687 ATP6V1G1O75348 118 aa8.79□□□□□ -1
SPARC-209ENST00000539687 IL18BPO95998 194 aa8.79□□□□□ -1
SPARC-209ENST00000539687 VSIG10L2P0DP72 767 aa8.79□□□□□ -1
SPARC-209ENST00000539687 WT1P19544 449 aaPredicted RBP8.79□□□□□ -1
SPARC-209ENST00000539687 CXCL3P19876 107 aa8.79□□□□□ -1
SPARC-209ENST00000539687 FPR2P25090 351 aa8.79□□□□□ -1
SPARC-209ENST00000539687 CD34P28906 385 aa8.79□□□□□ -1
SPARC-209ENST00000539687 SNU13P55769 128 aaKnown RBP8.79□□□□□ -1
SPARC-209ENST00000539687 PMP22Q01453 160 aa8.79□□□□□ -1
SPARC-209ENST00000539687 DHODHQ02127 395 aa8.79□□□□□ -1
SPARC-209ENST00000539687 PRDX4Q13162 271 aa8.79□□□□□ -1
SPARC-209ENST00000539687 P2RY6Q15077 328 aa8.79□□□□□ -1
SPARC-209ENST00000539687 MPV17LQ2QL34 196 aa8.79□□□□□ -1
SPARC-209ENST00000539687 KRTCAP3Q53RY4 240 aa8.79□□□□□ -1
SPARC-209ENST00000539687 ATPAF1Q5TC12 328 aaPredicted RBP8.79□□□□□ -1
SPARC-209ENST00000539687 C9orf135Q5VTT2 229 aa8.79□□□□□ -1
SPARC-209ENST00000539687 ELP2Q6IA86 826 aa8.79□□□□□ -1
SPARC-209ENST00000539687 CRIP3Q6Q6R5 217 aa8.79□□□□□ -1
SPARC-209ENST00000539687 Q6ZS92 163 aa8.79□□□□□ -1
SPARC-209ENST00000539687 NLRC3Q7RTR2 1065 aa8.79□□□□□ -1
SPARC-209ENST00000539687 TMED4Q7Z7H5 227 aa8.79□□□□□ -1
SPARC-209ENST00000539687 LYG2Q86SG7 212 aa8.79□□□□□ -1
SPARC-209ENST00000539687 CD163Q86VB7 1156 aa8.79□□□□□ -1
SPARC-209ENST00000539687 ZNF573Q86YE8 665 aa8.79□□□□□ -1
SPARC-209ENST00000539687 C9orf62Q8N4C0 152 aa8.79□□□□□ -1
SPARC-209ENST00000539687 OR5AP2Q8NGF4 316 aa8.79□□□□□ -1
SPARC-209ENST00000539687 OR13C8Q8NGS7 320 aa8.79□□□□□ -1
SPARC-209ENST00000539687 PHB2Q99623 299 aa8.79□□□□□ -1
SPARC-209ENST00000539687 SLC6A7Q99884 636 aa8.79□□□□□ -1
SPARC-209ENST00000539687 PPA2Q9H2U2 334 aa8.79□□□□□ -1
SPARC-209ENST00000539687 CLEC4MQ9H2X3 399 aaPredicted RBP8.79□□□□□ -1
SPARC-209ENST00000539687 SHPKQ9UHJ6 478 aa8.79□□□□□ -1
SPARC-209ENST00000539687 PTPRBP23467 1997 aa8.79□□□□□ -1
SPARC-209ENST00000539687 A0A1W2PP11 408 aa8.78□□□□□ -1
SPARC-209ENST00000539687 FIGNL2A6NMB9 653 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms