RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MAD2L1BPQ15013 274 aaPredicted RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 TSC22D1Q15714 1073 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 COQ5Q5HYK3 327 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 FAM162BQ5T6X4 162 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CLEC18BQ6UXF7 455 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF620Q6ZNG0 422 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 Q6ZR03 302 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF546Q86UE3 836 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 WDFY1Q8IWB7 410 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 C1orf158Q8N1D5 194 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 WDR31Q8NA23 367 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 GPR26Q8NDV2 337 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PROKR2Q8NFJ6 384 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 TTLQ8NG68 377 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF596Q8TC21 504 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PDCD6IPQ8WUM4 868 aaKnown RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 OTUB2Q96DC9 234 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 YIPF6Q96EC8 236 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 UBE2E2Q96LR5 201 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 TAAR1Q96RJ0 339 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 MICU1Q9BPX6 476 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 TIMM29Q9BSF4 260 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ACTR3CQ9C0K3 210 aaPredicted RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ARMC7Q9H6L4 198 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 AIG1Q9NVV5 245 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 NXT1Q9UKK6 140 aaKnown RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 DDX19BQ9UMR2 479 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 GOLT1BQ9Y3E0 138 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 SAMHD1Q9Y3Z3 626 aaKnown RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ATG2BQ96BY7 2078 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 TICRRQ7Z2Z1 1910 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 EPPK1P58107 5090 aaKnown RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 MROH7Q68CQ1 1323 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 SCN4AP35499 1836 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ANKRD30AQ9BXX3 1397 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ABCC8Q09428 1581 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 VPS13BQ7Z7G8 4022 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 BLMP54132 1417 aaPredicted RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 UBR4Q5T4S7 5183 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 A0A1B0GX12 115 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CENPXA8MT69 81 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ANKRD63C9JTQ0 380 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 F6UB75 175 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 SMKR1H3BMG3 65 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 GOLGA8TH3BQL2 631 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CA11O75493 328 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 EEDO75530 441 aaKnown RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 MMP23AO75900 390 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 TPM3P06753 285 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CHTF8P0CG12 524 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 C1GALT1C1LP0DN25 315 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 THRAP10827 490 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 BCKDHBP21953 392 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PSMB9P28065 219 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 GNRHRP30968 328 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PRSS3P35030 304 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PMELP40967 661 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 SH3BGRP55822 239 aaPredicted RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 MRPS15P82914 257 aaKnown RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 GUCA2BQ16661 112 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CDNFQ49AH0 187 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 LCN12Q6JVE5 192 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF530Q6P9A1 599 aaPredicted RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ALKAL1Q6UXT8 129 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 MTERF4Q7Z6M4 381 aaKnown RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF664Q8N3J9 261 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PRELID2Q8N945 189 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 OR4M1Q8NGD0 313 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 OR10AD1Q8NGE0 317 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 OR1L1Q8NH94 360 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 LGALS14Q8TCE9 139 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 FAM131CQ96AQ9 280 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PHYHIPLQ96FC7 376 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 FCRL1Q96LA6 429 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 RBBP8Q99708 897 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PDCD1LG2Q9BQ51 273 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 SRMSQ9H3Y6 488 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 RDH14Q9HBH5 336 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 DIABLOQ9NR28 239 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PXMP2Q9NR77 195 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 HRASLS2Q9NWW9 162 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 UBIAD1Q9Y5Z9 338 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PLXNA2O75051 1894 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 NUP210Q8TEM1 1887 aaPredicted RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 UBR1Q8IWV7 1749 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 USP34Q70CQ2 3546 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 RAB3GAP2Q9H2M9 1393 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 MAST1Q9Y2H9 1570 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PAPPAQ13219 1627 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SETXQ7Z333 2677 aaKnown RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 RALGAPA2Q2PPJ7 1873 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 HERC2O95714 4834 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 A8MWL6 223 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 C11orf94C9JXX5 98 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 K7EN84 100 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 PRMT5O14744 637 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ANGPTL7O43827 346 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CALUO43852 315 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 FARS2O95363 451 aaKnown RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SERPINA5P05154 406 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms