RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ENDOGQ14249 297 aaKnown RBP12.72□□□□□ -0.37
CDCA3-207ENST00000538862 PLEKHN1Q494U1 663 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-207ENST00000538862 PRSS54Q6PEW0 395 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 ATRAIDQ6UW56 229 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 OR1S2Q8NGQ3 325 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 EMG1Q92979 244 aaKnown RBP12.72□□□□□ -0.37
CDCA3-207ENST00000538862 SMG1Q96Q15 3661 aaKnown RBP12.72□□□□□ -0.37
CDCA3-207ENST00000538862 TAAR9Q96RI9 348 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 ST6GALNAC5Q9BVH7 336 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 PECRQ9BY49 303 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 ANGPTL4Q9BY76 406 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 CHST5Q9GZS9 411 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 PCDHB10Q9UN67 800 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 ATMQ13315 3056 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 FIGNL2A6NMB9 653 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 H0YIZ8 118 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 STMND1H3BQB6 276 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 CD79AP11912 226 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 BLVRBP30043 206 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-207ENST00000538862 SNU13P55769 128 aaKnown RBP12.72□□□□□ -0.37
CDCA3-207ENST00000538862 CSNK2A1P68400 391 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-207ENST00000538862 IL11RAQ14626 422 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 UBE2V2Q15819 145 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 TMEM164Q5U3C3 297 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 C1QL2Q7Z5L3 287 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 ZSCAN4Q8NAM6 433 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-207ENST00000538862 CSNK2A3Q8NEV1 391 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 RNF141Q8WVD5 230 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 HAS2Q92819 552 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 NABP1Q96AH0 204 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 S100A13Q99584 98 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 NAA11Q9BSU3 229 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-207ENST00000538862 AKIRIN1Q9H9L7 192 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-207ENST00000538862 CYTL1Q9NRR1 136 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 IGHV1-45A0A0A0MS14 117 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 F5H5K5 113 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 DNASE2O00115 360 aaPredicted RBP12.71□□□□□ -0.37
CDCA3-207ENST00000538862 DHHO43323 396 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 CPT2P23786 658 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 ECI1P42126 302 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 SLC6A9P48067 706 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 SUCLG1P53597 346 aaKnown RBP12.71□□□□□ -0.37
CDCA3-207ENST00000538862 DSCR4P56555 118 aaPredicted RBP12.71□□□□□ -0.37
CDCA3-207ENST00000538862 DEFA5Q01523 94 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 SLC9A3R2Q15599 337 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 EXT1Q16394 746 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 PHYHD1Q5SRE7 291 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 VASH2Q86V25 355 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 TMEM123Q8N131 208 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 NTNG2Q96CW9 530 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 RRNAD1Q96FB5 475 aaKnown RBP12.71□□□□□ -0.37
CDCA3-207ENST00000538862 C2orf50Q96LR7 162 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 IMMP1LQ96LU5 166 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 RBM14Q96PK6 669 aaKnown RBP12.71□□□□□ -0.37
CDCA3-207ENST00000538862 AQP10Q96PS8 301 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 ZNF700Q9H0M5 742 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 SLC6A15Q9H2J7 730 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 EHFQ9NZC4 300 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 DNAJB11Q9UBS4 358 aa12.71□□□□□ -0.37
CDCA3-207ENST00000538862 C5orf63A6NC05 138 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 B4E171 279 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 NPIPA2E9PIF3 369 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 NPIPA3F8WFD2 350 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 PET100P0DJ07 73 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 FCGR2AP12318 317 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 TSPAN7P41732 249 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 AIMP2Q13155 320 aaKnown RBP12.7□□□□□ -0.38
CDCA3-207ENST00000538862 IL15RAQ13261 267 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 RSPO1Q2MKA7 263 aaPredicted RBP12.7□□□□□ -0.38
CDCA3-207ENST00000538862 ANKRD55Q3KP44 614 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 DCAF12Q5T6F0 453 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 OR9K2Q8NGE7 335 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 USB1Q9BQ65 265 aaKnown RBP12.7□□□□□ -0.38
CDCA3-207ENST00000538862 NKX6-2Q9C056 277 aaPredicted RBP12.7□□□□□ -0.38
CDCA3-207ENST00000538862 OR5H15A6NDH6 313 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 NUPL2O15504 423 aaKnown RBP12.7□□□□□ -0.38
CDCA3-207ENST00000538862 KCNAB3O43448 404 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 ZIC3O60481 467 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 ADAP1O75689 374 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 ATG12O94817 140 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 HPNP05981 417 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 CD63P08962 238 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 LIFP15018 202 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 RPS2P15880 293 aaKnown RBP12.7□□□□□ -0.38
CDCA3-207ENST00000538862 CHRFAM7AQ494W8 412 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 DRAM2Q6UX65 266 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 OR5T2Q8NGG2 359 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 OR5D18Q8NGL1 313 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 M1APQ8TC57 530 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 SPTSSAQ969W0 71 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 ZNF385AQ96PM9 386 aaKnown RBP12.7□□□□□ -0.38
CDCA3-207ENST00000538862 METTL8Q9H825 291 aaKnown RBP12.7□□□□□ -0.38
CDCA3-207ENST00000538862 ASF1BQ9NVP2 202 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 FOXD3Q9UJU5 478 aaPredicted RBP12.7□□□□□ -0.38
CDCA3-207ENST00000538862 PIGLQ9Y2B2 252 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 ZNF175Q9Y473 711 aa12.7□□□□□ -0.38
CDCA3-207ENST00000538862 TMEM218A2RU14 115 aa12.69□□□□□ -0.38
CDCA3-207ENST00000538862 M0R135 149 aa12.69□□□□□ -0.38
CDCA3-207ENST00000538862 FAHP16930 419 aa12.69□□□□□ -0.38
CDCA3-207ENST00000538862 PI3P19957 117 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms