RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 A0A1W2PQ09 198 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 A0A1W2PRD5 423 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 A0A1W2PRF3 423 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 A0A1W2PRM7 423 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 DLGAP1O14490 977 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 SYNGR1O43759 233 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 ACAA1P09110 424 aaPredicted RBP12.3□□□□□ -0.44
RAB40B-202ENST00000538809 PSG2P11465 335 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 CLVS2Q5SYC1 327 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 C10orf67Q8IYJ2 551 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 CMTM4Q8IZR5 234 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 PQLC1Q8N2U9 271 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 KIR3DL3Q8N743 410 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 Q8N7P7 452 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 ZNRF1Q8ND25 227 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 TMEM185AQ8NFB2 350 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 OR10H4Q8NGA5 316 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 SGMS2Q8NHU3 365 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 C8orf46Q8TAG6 207 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 MED30Q96HR3 178 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 C9orf16Q9BUW7 83 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 IMPAD1Q9NX62 359 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.3□□□□□ -0.44
RAB40B-202ENST00000538809 ORC6Q9Y5N6 252 aa12.3□□□□□ -0.44
RAB40B-202ENST00000538809 PQLC2LA1A4F0 135 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 RNASEK-C17orf49H0YIS7 233 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 GPR37O15354 613 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 SPRY1O43609 319 aaPredicted RBP12.29□□□□□ -0.44
RAB40B-202ENST00000538809 IGHV4-59P01825 116 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 KIR3DL2P43630 455 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 HAAOP46952 286 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 CEBPDP49716 269 aaPredicted RBP12.29□□□□□ -0.44
RAB40B-202ENST00000538809 MEDAGQ5VYS4 303 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 SHISA2Q6UWI4 295 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 ACP7Q6ZNF0 438 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 PRSS35Q8N3Z0 413 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 PNKDQ8N490 385 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 POC1AQ8NBT0 407 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 ZNF671Q8TAW3 534 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 TRMT10AQ8TBZ6 339 aaKnown RBP12.29□□□□□ -0.44
RAB40B-202ENST00000538809 DMRTB1Q96MA1 342 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 AASSQ9UDR5 926 aa12.29□□□□□ -0.44
RAB40B-202ENST00000538809 EXOGQ9Y2C4 368 aaKnown RBP12.29□□□□□ -0.44
RAB40B-202ENST00000538809 J3QT63 122 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 CRYBA1P05813 215 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 MPZP25189 248 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 CAPZA1P52907 286 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 RAG2P55895 527 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 CAV3P56539 151 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 RELBQ01201 579 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 SMIM21Q3B7S5 101 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 TP53I3Q53FA7 332 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 ENTHD1Q8IYW4 607 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 NPRL2Q8WTW4 380 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 SSMEM1Q8WWF3 244 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 RNFT2Q96EX2 444 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 MAB21L2Q9Y586 359 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 POMT1Q9Y6A1 747 aa12.28□□□□□ -0.44
RAB40B-202ENST00000538809 RFPL4AA6NLU0 287 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 RFPL4AL1F8VTS6 287 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 NOS1APO75052 506 aaPredicted RBP12.27□□□□□ -0.45
RAB40B-202ENST00000538809 PGA5P0DJD9 388 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 ATP6V1E1P36543 226 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 ACTC1P68032 377 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 ACTA1P68133 377 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 FDX2Q6P4F2 183 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 METAP1DQ6UB28 335 aaPredicted RBP12.27□□□□□ -0.45
RAB40B-202ENST00000538809 LDLRAD3Q86YD5 345 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 FAM185AQ8N0U4 392 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 TMEM86BQ8N661 226 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 CD177Q8N6Q3 437 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 CCDC54Q8NEL0 328 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 RHOXF1Q8NHV9 184 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 LGALS12Q96DT0 336 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 SDSLQ96GA7 329 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 PLEKHA1Q9HB21 404 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 C1RLQ9NZP8 487 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.27□□□□□ -0.45
RAB40B-202ENST00000538809 GMPPBQ9Y5P6 360 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 MGAM2Q2M2H8 2515 aa12.27□□□□□ -0.45
RAB40B-202ENST00000538809 PKD1L1Q8TDX9 2849 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 LOC107986453A0A1B0GWG9 222 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 FAM230AA0A1W2PPH8 454 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 ANKRD61A6NGH8 418 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 NPFFO15130 113 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 SYT7O43581 403 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 GPR137BO60478 399 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 NXPH2O95156 264 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 IER3P46695 156 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 NANOS3P60323 173 aaKnown RBP12.26□□□□□ -0.45
RAB40B-202ENST00000538809 ERVK11-1P61568 191 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 GUCA2AQ02747 115 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 ZNF91Q05481 1191 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 UBE2V2Q15819 145 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 ZBTB49Q6ZSB9 765 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 ANGPTL5Q86XS5 388 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 ZNF573Q86YE8 665 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 CALHM1Q8IU99 346 aa12.26□□□□□ -0.45
RAB40B-202ENST00000538809 OR2G2Q8NGZ5 317 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms