RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 PI3P19957 117 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 BCKDHBP21953 392 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 DUSP1P28562 367 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 OR10J1P30954 320 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 GALNSP34059 522 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 GABRA3P34903 492 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 CHRNA7P36544 502 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 ALDH3B1P43353 468 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 SLC6A8P48029 635 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 IDH3GP51553 393 aaPredicted RBP5.89□□□□□ -1.47
USP28-207ENST00000538475 FAM3BP58499 235 aaPredicted RBP5.89□□□□□ -1.47
USP28-207ENST00000538475 BTN3A2P78410 334 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 CDK3Q00526 305 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 BAXQ07812 192 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 MEP1BQ16820 701 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 PCK2Q16822 640 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.89□□□□□ -1.47
USP28-207ENST00000538475 PRICKLE4Q2TBC4 344 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 CHRFAM7AQ494W8 412 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 DNM1P34Q6PK57 102 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 C6orf15Q6UXA7 325 aaPredicted RBP5.89□□□□□ -1.47
USP28-207ENST00000538475 PARS2Q7L3T8 475 aaKnown RBP5.89□□□□□ -1.47
USP28-207ENST00000538475 CMTM8Q8IZV2 173 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 FAM89BQ8N5H3 189 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 SLC35G3Q8N808 338 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 OR51A4Q8NGJ6 313 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 OR5D14Q8NGL3 314 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 OR52N5Q8NH56 324 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 C8orf44Q96CB5 159 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 BSCL2Q96G97 398 aaPredicted RBP5.89□□□□□ -1.47
USP28-207ENST00000538475 SLC46A1Q96NT5 459 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 TGM7Q96PF1 710 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 AGMATQ9BSE5 352 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 TMEM208Q9BTX3 173 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 C20orf24Q9BUV8 137 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 SNHG12Q9BXW3 62 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 OPN3Q9H1Y3 402 aaPredicted RBP5.89□□□□□ -1.47
USP28-207ENST00000538475 PLK3Q9H4B4 646 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 MOB1AQ9H8S9 216 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.89□□□□□ -1.47
USP28-207ENST00000538475 TM7SF3Q9NS93 570 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 TAS2R4Q9NYW5 299 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 CLEC4EQ9ULY5 219 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 PLAGL1Q9UM63 463 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 EMC9Q9Y3B6 208 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 MMACHCQ9Y4U1 282 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 INSL5Q9Y5Q6 135 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 MMP24Q9Y5R2 645 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 WSB1Q9Y6I7 421 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 CHD3Q12873 2000 aaKnown RBP5.89□□□□□ -1.47
USP28-207ENST00000538475 RALGAPA1Q6GYQ0 2036 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 DUXBA0A1W2PPF3 345 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 SERINC4A6NH21 518 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 CRYM-AS1A6NIL9 109 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 GRXCR1A8MXD5 290 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 C4orf51C9J302 202 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 MASP2O00187 686 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 GEMIN2O14893 280 aaKnown RBP5.88□□□□□ -1.47
USP28-207ENST00000538475 TNFSF14O43557 240 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 MMP23AO75900 390 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 OR6A2O95222 327 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 CDS2O95674 445 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 TYMSP04818 313 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 CSN2P05814 226 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 DBHP09172 617 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 CST2P09228 141 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 OR13C7P0DN81 318 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 LIPCP11150 499 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 C6P13671 934 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 ST6GAL1P15907 406 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 AMY2BP19961 511 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 UCP1P25874 307 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 PSMB5P28074 263 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 SFTPDP35247 375 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 APOBEC1P41238 236 aaKnown RBP5.88□□□□□ -1.47
USP28-207ENST00000538475 OR3A1P47881 315 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 FLT3LGP49771 235 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 EMP2P54851 167 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 RAB38P57729 211 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 CLDN2P57739 230 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 RPS20P60866 119 aaKnown RBP5.88□□□□□ -1.47
USP28-207ENST00000538475 RND3P61587 244 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 MRPS11P82912 194 aaKnown RBP5.88□□□□□ -1.47
USP28-207ENST00000538475 HSF1Q00613 529 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 SP3Q02447 781 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 PAX5Q02548 391 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 MGAT2Q10469 447 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 SGCGQ13326 291 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 ENPP2Q13822 863 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 FZD2Q14332 565 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 GNMTQ14749 295 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 TGIF1Q15583 401 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 SLC9A3R2Q15599 337 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 NKAIN1Q4KMZ8 207 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 TMEM31Q5JXX7 168 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 AADACL3Q5VUY0 350 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 C1orf140Q5VVS0 124 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 TXNDC8Q6A555 127 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 SPSB3Q6PJ21 355 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 TMPPEQ6ZT21 453 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms