RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 GPX8Q8TED1 209 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 PCNPQ8WW12 178 aaKnown RBP4.74□□□□□ -1.65
LRP6-203ENST00000538239 ZNF486Q96H40 463 aaPredicted RBP4.74□□□□□ -1.65
LRP6-203ENST00000538239 GUCD1Q96NT3 240 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 PCGF1Q9BSM1 259 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 FLVCR2Q9UPI3 526 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 STRAPQ9Y3F4 350 aaKnown RBP4.74□□□□□ -1.65
LRP6-203ENST00000538239 PDCD11Q14690 1871 aaKnown RBP4.74□□□□□ -1.65
LRP6-203ENST00000538239 IGKV1-8A0A0C4DH67 115 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 PRR33A8MZF0 331 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 SMAD7O15105 426 aaKnown RBP4.74□□□□□ -1.65
LRP6-203ENST00000538239 HBE1P02100 147 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 TFAP2AP05549 437 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 PRF1P14222 555 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 PAX6P26367 422 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 CD80P33681 288 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 PTGFRP43088 359 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 UBE2KP61086 200 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 INSL4Q14641 139 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 FBXW9Q5XUX1 488 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 FAHD2BQ6P2I3 314 aaPredicted RBP4.74□□□□□ -1.65
LRP6-203ENST00000538239 CLEC2AQ6UVW9 174 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 FAHD2AQ96GK7 314 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 ARHGAP5-AS1Q96IT6 56 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 OR2D2Q9H210 308 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 MSL2Q9HCI7 577 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 RAXQ9Y2V3 346 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 LIPGQ9Y5X9 500 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 HSBP1L1C9JCN9 74 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 FABP7O15540 132 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 ST8SIA3O43173 380 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 IGKV1D-16P01601 117 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 OPN1MWP04001 364 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 FUCA1P04066 466 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 CST2P09228 141 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 OPN1MW2P0DN77 364 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 OPN1MW3P0DN78 364 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 DHODHQ02127 395 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 AVPI1Q5T686 147 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 C6orf201Q7Z4U5 140 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 MFSD4AQ8N468 514 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 OR52N4Q8NGI2 321 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 C20orf24Q9BUV8 137 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 TAF9BQ9HBM6 251 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 H0Y8G0 127 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 TDRD6O60522 2096 aaKnown RBP4.74□□□□□ -1.65
LRP6-203ENST00000538239 AQP8O94778 261 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 TOX4O94842 621 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 JUNBP17275 347 aaPredicted RBP4.74□□□□□ -1.65
LRP6-203ENST00000538239 ADRA2CP18825 462 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 BPIFB3P59826 476 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 MN1Q10571 1320 aaPredicted RBP4.74□□□□□ -1.65
LRP6-203ENST00000538239 RNF165Q6ZSG1 346 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 ZNF767PQ75MW2 155 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 OR4D11Q8NGI4 311 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 OR13C8Q8NGS7 320 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 DPF1Q92782 380 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 SERTM2A0A1B0GWG4 89 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 OIP5O43482 229 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 OR7C2O60412 319 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 ANKRD34CP0C6C1 535 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 CEACAM3P40198 252 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 PPT1P50897 306 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 P2RX3P56373 397 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 OPCMLQ14982 345 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 ZNF528Q3MIS6 628 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 CREB3L2Q70SY1 520 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 TIPARPQ7Z3E1 657 aaKnown RBP4.74□□□□□ -1.65
LRP6-203ENST00000538239 RNF7Q9UBF6 113 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 UGT2A1Q9Y4X1 527 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 KCNMB2Q9Y691 235 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 DNASE2O00115 360 aaPredicted RBP4.73□□□□□ -1.65
LRP6-203ENST00000538239 SULT1C2O00338 296 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 CDIPTO14735 213 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 TIAF1O95411 115 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 KRASP01116 189 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 COX6A1P12074 109 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 CEACAM1P13688 526 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 OPRK1P41145 380 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 OR3A1P47881 315 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 INPP5JQ15735 1006 aaPredicted RBP4.73□□□□□ -1.65
LRP6-203ENST00000538239 PLPPR5Q32ZL2 321 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 ACSM6Q6P461 480 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 OR2T6Q8NHC8 308 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 SFT2D1Q8WV19 159 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 ZNF385AQ96PM9 386 aaKnown RBP4.73□□□□□ -1.65
LRP6-203ENST00000538239 SCNM1Q9BWG6 230 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 NTN4Q9HB63 628 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 C19orf12Q9NSK7 152 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 RCL1Q9Y2P8 373 aaKnown RBP4.73□□□□□ -1.65
LRP6-203ENST00000538239 SCN10AQ9Y5Y9 1956 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 SPAG17Q6Q759 2223 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 EPXP11678 715 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 M6PRP20645 277 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 FGF7P21781 194 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 ACP1P24666 158 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 MDH2P40926 338 aaKnown RBP4.73□□□□□ -1.65
LRP6-203ENST00000538239 C19orf57Q0VDD7 668 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 NHLRC1Q6VVB1 395 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 APH1BQ8WW43 257 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms