RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ZBTB37Q5TC79 503 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 MS4A15Q8N5U1 240 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 ZNF519Q8TB69 540 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 NUDCD2Q8WVJ2 157 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 BARHL1Q9BZE3 327 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 FN3KRPQ9HA64 309 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 PTPRBP23467 1997 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 TMEM235A6NFC5 223 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 CTDSP2O14595 271 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 GLRXP35754 106 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 GNB1P62873 340 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 ZNF85Q03923 595 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 DCAF12L2Q5VW00 463 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 RSBN1Q5VWQ0 802 aaPredicted RBP6.2□□□□□ -1.42
MSH6-209ENST00000538136 SLC36A1Q7Z2H8 476 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 CSNK2A3Q8NEV1 391 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 OR1M1Q8NGA1 313 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 SECTM1Q8WVN6 248 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 TMPRSS13Q9BYE2 586 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 TAS2R8Q9NYW2 309 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 V9GY05 133 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 TMEM212A6NML5 194 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 UBCP0CG48 685 aaKnown RBP6.19□□□□□ -1.42
MSH6-209ENST00000538136 GTF2F2P13984 249 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 MYF6P23409 242 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 CCKARP32238 428 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 HGFACQ04756 655 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 SSX2Q16385 188 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 ZNF672Q499Z4 452 aaPredicted RBP6.19□□□□□ -1.42
MSH6-209ENST00000538136 CCDC92Q53HC0 331 aaPredicted RBP6.19□□□□□ -1.42
MSH6-209ENST00000538136 LRRC10Q5BKY1 277 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 LRRTM1Q86UE6 522 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 WDR31Q8NA23 367 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 ARL11Q969Q4 196 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 GPHA2Q96T91 129 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 TSC22D3Q99576 134 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 FKBP14Q9NWM8 211 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 FOXD3Q9UJU5 478 aaPredicted RBP6.19□□□□□ -1.42
MSH6-209ENST00000538136 CAB39Q9Y376 341 aaPredicted RBP6.19□□□□□ -1.42
MSH6-209ENST00000538136 IGLV3-32A0A0A0MS00 114 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 PRR32B1ATL7 298 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 TTRP02766 147 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 CRYBA1P05813 215 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 LSM6P62312 80 aaKnown RBP6.19□□□□□ -1.42
MSH6-209ENST00000538136 OCLNQ16625 522 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 CHRFAM7AQ494W8 412 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 SLC35D3Q5M8T2 416 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 CLVS2Q5SYC1 327 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 ZNF362Q5T0B9 420 aaPredicted RBP6.19□□□□□ -1.42
MSH6-209ENST00000538136 PRSS48Q7RTY5 328 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 C6orf201Q7Z4U5 140 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 MOB3BQ86TA1 216 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 ZNF573Q86YE8 665 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 ZNF565Q8N9K5 539 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 OR10X1Q8NGY0 326 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 FAM222BQ8WU58 562 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 ANKRD60Q9BZ19 345 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 OR2S2Q9NQN1 319 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 RNF7Q9UBF6 113 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 TRAV8-7A0A075B6U6 113 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 LYPD3O95274 346 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 SRMP19623 302 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 EPHA1P21709 976 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 HTR2CP28335 458 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 ACTG1P63261 375 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 FABP5Q01469 135 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 ADIPOQQ15848 244 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 DGUOKQ16854 277 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 FGFRL1Q8N441 504 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 LGALS14Q8TCE9 139 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 FAAP24Q9BTP7 215 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 SUCNR1Q9BXA5 334 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 ZCCHC4Q9H5U6 513 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 LIN7BQ9HAP6 207 aa6.19□□□□□ -1.42
MSH6-209ENST00000538136 PAK1IP1Q9NWT1 392 aaPredicted RBP6.19□□□□□ -1.42
MSH6-209ENST00000538136 TEX13DA0A0J9YY54 714 aaPredicted RBP6.18□□□□□ -1.42
MSH6-209ENST00000538136 DHRS3O75911 302 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 CLDN1O95832 211 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 GNB3P16520 340 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 BCL3P20749 454 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 SSTR2P30874 369 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 RAB13P51153 203 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 RPL31P62899 125 aaKnown RBP6.18□□□□□ -1.42
MSH6-209ENST00000538136 CDK5R1Q15078 307 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 LINC01590Q5TEZ4 76 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 DMRTC2Q8IXT2 367 aaPredicted RBP6.18□□□□□ -1.42
MSH6-209ENST00000538136 OR51H1Q8NH63 302 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 HPS1Q92902 700 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 PIMREGQ9BSJ6 248 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 SELENOKQ9Y6D0 94 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 CHD3Q12873 2000 aaKnown RBP6.18□□□□□ -1.42
MSH6-209ENST00000538136 BTBD17A6NE02 478 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 B9A039 149 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 PDCD5O14737 125 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 TUSC2O75896 110 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 ZNF154Q13106 437 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 C12orf73Q69YU5 71 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 FAAP20Q6NZ36 180 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 C5orf24Q7Z6I8 188 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 RNF133Q8WVZ7 376 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms